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December 2019

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Subject	From	Date	Size
Re: Group Leader Opening at the Novo Nordisk Foundation Center for Protein Research	Guillermo Montoya	Tue, 31 Dec 2019 23:06:35 +0000	309 lines
Re: Bayesian polishing error	Takanori Nakane	Tue, 31 Dec 2019 17:17:53 +0000	89 lines
Re: ObservationModel::getBoxSize: box sizes not available error	Takanori Nakane	Tue, 31 Dec 2019 17:07:50 +0000	122 lines
Bayesian polishing error	Gambelli, Lavinia	Tue, 31 Dec 2019 16:39:47 +0000	222 lines
Re: ObservationModel::getBoxSize: box sizes not available error	Takanori Nakane	Mon, 30 Dec 2019 23:39:50 +0000	83 lines
ObservationModel::getBoxSize: box sizes not available error	eswar reddy	Mon, 30 Dec 2019 18:34:44 -0500	101 lines
Re: Model bias	Sayan Bhakta	Sun, 29 Dec 2019 07:30:16 +0530	211 lines
Model bias	structure biology	Sat, 28 Dec 2019 16:41:13 -0500	99 lines
Re: FSC getting much worse after particle polishing	Minglei Zhao	Tue, 24 Dec 2019 22:50:03 -0500	447 lines
Re: Relion 3.1 CtfRefine anisotropic magnification	Takanori Nakane	Tue, 24 Dec 2019 23:12:40 +0000	119 lines
Relion 3.1 CtfRefine anisotropic magnification	Haji-Ghassemi, Omid	Tue, 24 Dec 2019 22:20:15 +0000	2752 lines
Re: Relion3.1 relion_star_handler drops data_particles	Thomas Laughlin	Sun, 22 Dec 2019 14:33:56 -0800	187 lines
Re: Relion3.1 relion_star_handler drops data_particles	Takanori Nakane	Sun, 22 Dec 2019 22:31:26 +0000	77 lines
Re: Relion3.1 relion_star_handler drops data_particles	Takanori Nakane	Sun, 22 Dec 2019 22:05:40 +0000	50 lines
Relion3.1 relion_star_handler drops data_particles	Tom Laughlin	Sat, 21 Dec 2019 21:18:16 +0000	39 lines
Re: relion 3.1 memory handling	Clemens Grimm	Sat, 21 Dec 2019 16:26:10 +0000	113 lines
Re: relion 3.1 memory handling	Takanori Nakane	Sat, 21 Dec 2019 15:20:14 +0000	72 lines
relion 3.1 memory handling	Eric Hanssen	Sat, 21 Dec 2019 11:38:22 +0000	1690 lines
Re: Issue with importing from Warp	Takanori Nakane	Fri, 20 Dec 2019 22:34:54 +0000	90 lines
Re: Issue with importing from Warp	Takanori Nakane	Fri, 20 Dec 2019 21:20:26 +0000	59 lines
Issue with importing from Warp	Christopher Arthur	Fri, 20 Dec 2019 13:18:16 -0800	73 lines
Re: swapping out mrc for tiff in a current project	Takanori Nakane	Fri, 20 Dec 2019 13:03:24 -0000	165 lines
Re: swapping out mrc for tiff in a current project	Daniel Larsson	Fri, 20 Dec 2019 12:53:23 +0000	86 lines
Re: swapping out mrc for tiff in a current project	Takanori Nakane	Fri, 20 Dec 2019 12:41:10 -0000	102 lines
PDBe workshop: Making the most of PDB data with our new graph database	David Armstrong	Fri, 20 Dec 2019 10:45:20 +0000	148 lines
Re: swapping out mrc for tiff in a current project	Takanori Nakane	Thu, 19 Dec 2019 22:34:03 +0000	85 lines
Re: swapping out mrc for tiff in a current project	Daniel Larsson	Thu, 19 Dec 2019 21:46:04 +0000	51 lines
Re: swapping out mrc for tiff in a current project	Takanori Nakane	Thu, 19 Dec 2019 21:20:16 +0000	52 lines
swapping out mrc for tiff in a current project	Daniel Larsson	Thu, 19 Dec 2019 20:37:22 +0000	30 lines
Warp-to-Relion processing	Christopher Arthur	Thu, 19 Dec 2019 08:08:19 -0800	45 lines
Open position - EMBL Grenoble	Wojtek Galej	Thu, 19 Dec 2019 14:50:16 +0100	28 lines
NCCAT 2020-C2 CryoEM access proposal deadline - January 1, 2020 - NYC, USA	Ed Eng	Thu, 19 Dec 2019 01:05:08 +0000	226 lines
Converting .cs to .star file	Joon Park	Wed, 18 Dec 2019 22:16:17 +0000	35 lines
Re: Relion optics group	Takanori Nakane	Wed, 18 Dec 2019 17:11:18 -0000	49 lines
Relion optics group	Reza Khayat	Wed, 18 Dec 2019 16:41:14 +0000	83 lines
Re: Relion tutorial	Reinhard Rachel	Wed, 18 Dec 2019 16:54:45 +0100	48 lines
Re: Relion tutorial	Ashu Sharma	Wed, 18 Dec 2019 10:39:50 -0500	141 lines
Re: Relion tutorial	Ashu Sharma	Wed, 18 Dec 2019 10:36:48 -0500	125 lines
Re: [EXTERNAL] Re: [ccpem] Relion tutorial	Alex Berndt	Wed, 18 Dec 2019 15:34:17 +0000	73 lines
Re: Relion tutorial	Takanori Nakane	Wed, 18 Dec 2019 15:30:46 -0000	47 lines
Relion tutorial	Ashu Sharma	Wed, 18 Dec 2019 10:21:08 -0500	46 lines
Ph D opportunities at the Leicester Institute of Structural and Chemical Biology, University of Leicester	Louise Fairall	Wed, 18 Dec 2019 14:04:48 +0000	1174 lines
Open positions - NeCEN	Renault, L.L.R. (Ludo)	Wed, 18 Dec 2019 11:24:56 +0000	179 lines
Local resolution estimation inconsistency	Julien Bous	Wed, 18 Dec 2019 11:39:23 +0100	111 lines
Re: merging two datasets	Takanori Nakane	Tue, 17 Dec 2019 20:10:35 +0000	134 lines
Re: merging two datasets	Y. Mutum	Tue, 17 Dec 2019 18:07:34 +0000	300 lines
PhD / PostDoc positions @NKI Amsterdam	Anastassis Perrakis	Tue, 17 Dec 2019 16:35:26 +0000	76 lines
Faculty position at OSU	Marcos Sotomayor	Mon, 16 Dec 2019 21:02:11 -0500	224 lines
EMBL and Intruct-ERIC membership	Claudia Alen Amaro	Mon, 16 Dec 2019 15:53:28 +0000	273 lines
Deadline extended: First CCP4 Study Weekend illustration competition	Jon Agirre	Mon, 16 Dec 2019 10:28:12 +0000	179 lines
Re: RELION-3.1 --external_reconstruct	Takanori Nakane	Sun, 15 Dec 2019 05:08:17 +0000	74 lines
RELION-3.1 --external_reconstruct	Charles Bayly-Jones	Sun, 15 Dec 2019 13:18:50 +1100	128 lines
Re: trouble building Relion 3.1b	Daniel Larsson	Fri, 13 Dec 2019 14:53:18 +0000	216 lines
UMass Medical School Worcester MA - Postdoctoral Appointment - Korostelev Lab RNA Therapeutics Institute	Powers, Ann	Fri, 13 Dec 2019 14:41:59 +0000	740 lines
Re: trouble building Relion 3.1b	Takanori Nakane	Fri, 13 Dec 2019 14:02:53 -0000	254 lines
Re: trouble building Relion 3.1b	Daniel Larsson	Fri, 13 Dec 2019 13:41:40 +0000	187 lines
trouble building Relion 3.1b	Daniel Larsson	Fri, 13 Dec 2019 13:39:17 +0000	174 lines
Re: no orientation was found better than any other in relion-3.0 beta	Linhua Tai	Fri, 13 Dec 2019 02:40:29 +0000	23 lines
Postdoctoral position for cryo-EM	Yongna Xing	Thu, 12 Dec 2019 23:31:22 +0000	509 lines
Re: SV: [ccpem] bioRxiv amyloid preprint	Takanori Nakane	Thu, 12 Dec 2019 22:05:23 +0000	109 lines
SV: [ccpem] bioRxiv amyloid preprint	Irina Iakovleva	Thu, 12 Dec 2019 20:11:45 +0000	268 lines
Re: re-extracting particles in Relion	Takanori Nakane	Thu, 12 Dec 2019 16:33:36 -0000	45 lines
re-extracting particles in Relion	Joon Park	Thu, 12 Dec 2019 16:16:49 +0000	27 lines
Re: Relion 3.1	Takanori Nakane	Thu, 12 Dec 2019 15:59:31 -0000	92 lines
Re: no orientation was found better than any other in relion-3.0 beta	Takanori Nakane	Thu, 12 Dec 2019 15:20:39 -0000	83 lines
no orientation was found better than any other in relion-3.0 beta	Linhua Tai	Thu, 12 Dec 2019 15:17:56 +0000	65 lines
Re: 2D Class centring problems in RELION3.1	Laurence Pearl	Thu, 12 Dec 2019 09:11:33 +0000	156 lines
Re: 2D Class centring problems in RELION3.1	Takanori Nakane	Thu, 12 Dec 2019 08:30:04 +0000	66 lines
2D Class centring problems in RELION3.1	Laurence Pearl	Thu, 12 Dec 2019 08:13:40 +0000	702 lines
Re: 3D refine tilt	Humayun Sharif	Thu, 12 Dec 2019 00:24:59 -0500	2561 lines
Re: 3D refine tilt	Dmitry Lyumkis	Thu, 12 Dec 2019 05:22:34 +0000	1977 lines
Re: 3D refine tilt	Humayun Sharif	Wed, 11 Dec 2019 21:01:43 -0500	1909 lines
Multibody refinement after helical reconstruction	John Jimah	Thu, 12 Dec 2019 01:28:50 +0000	44 lines
Re: 3D refine tilt	Dmitry Lyumkis	Wed, 11 Dec 2019 23:30:44 +0000	2046 lines
Re: Relion 3.1	Takanori Nakane	Wed, 11 Dec 2019 21:48:42 +0000	90 lines
Re: 3D refine tilt	Humayun Sharif	Wed, 11 Dec 2019 16:33:03 -0500	1431 lines
Re: 3D refine tilt	Takanori Nakane	Wed, 11 Dec 2019 21:28:43 +0000	594 lines
UMMS Postdoctoral Associate - Korostelev Lab RNA Therapeutics Institute	Ann Powers	Wed, 11 Dec 2019 19:50:24 +0000	275 lines
Re: 3D refine tilt	Humayun Sharif	Wed, 11 Dec 2019 12:26:23 -0500	4132 lines
Re: 3D refine tilt	Takanori Nakane	Wed, 11 Dec 2019 17:18:43 -0000	544 lines
Re: 3D refine tilt	Humayun Sharif	Wed, 11 Dec 2019 12:06:46 -0500	1090 lines
Re: 3D refine tilt	Takanori Nakane	Wed, 11 Dec 2019 16:57:41 -0000	68 lines
Re: Relion 3.1	Takanori Nakane	Wed, 11 Dec 2019 16:55:12 -0000	138 lines
Re: Relion 3.1	Takanori Nakane	Wed, 11 Dec 2019 16:52:25 -0000	112 lines
Re: Relion 3.1	Ragan, Tj (Dr.)	Wed, 11 Dec 2019 16:52:14 +0000	394 lines
3D refine tilt	Humayun Sharif	Wed, 11 Dec 2019 11:44:23 -0500	93 lines
Re: Relion 3.1	Mario Borgnia	Wed, 11 Dec 2019 11:29:44 -0500	220 lines
Re: Stuck in 2D classification	Brenda Gonzalez	Wed, 11 Dec 2019 15:59:32 +0000	159 lines
Stuck in 2D classification	Ding, Jienyu (NIH/NCI) [F]	Wed, 11 Dec 2019 10:48:12 -0500	31 lines
Re: Relion 3.1	Takanori Nakane	Wed, 11 Dec 2019 15:25:57 -0000	75 lines
Re: Relion 3.1	Ragan, Tj (Dr.)	Wed, 11 Dec 2019 15:09:03 +0000	153 lines
Understanding Biology through Structure, March 16-20, 2020	Tom Terwilliger	Wed, 11 Dec 2019 06:59:39 -0700	100 lines
60th Anniversary meeting of the British Biophysical Society.	Dave Scott	Wed, 11 Dec 2019 09:29:50 +0000	50 lines
Re: Initial Model in Relion	Takanori Nakane	Wed, 11 Dec 2019 08:17:55 +0000	43 lines
Initial Model in Relion	Joon Park	Tue, 10 Dec 2019 23:47:08 +0000	29 lines
Re: relion-3.1: very low GPU Util reported by nvidia-smi during refinement	Dieter Blaas	Tue, 10 Dec 2019 15:38:34 +0100	87 lines
Re: relion-3.1: very low GPU Util reported by nvidia-smi during refinement	Takanori Nakane	Tue, 10 Dec 2019 14:12:58 -0000	66 lines
relion-3.1: very low GPU Util reported by nvidia-smi during refinement	Dieter Blaas	Tue, 10 Dec 2019 14:58:44 +0100	45 lines
Examples of EM models at 4.0Å or better with serious modelling errors?	Gerard Kleywegt	Tue, 10 Dec 2019 13:25:46 +0000	63 lines
Relion 3.1	Mario Borgnia	Mon, 9 Dec 2019 19:17:39 -0500	48 lines
Re: Relion 3.1 -- re-extracting polished particles from movies	Takanori Nakane	Mon, 9 Dec 2019 21:18:54 +0000	65 lines
Relion 3.1 -- re-extracting polished particles from movies	Eric Lynch	Mon, 9 Dec 2019 20:13:32 +0000	32 lines
Re: Polishing in Relion 3.1	Takanori Nakane	Mon, 9 Dec 2019 17:25:23 -0000	50 lines
Polishing in Relion 3.1	James Conway	Mon, 9 Dec 2019 16:52:59 +0000	32 lines
Senior Cryo-EM Staff Scientist position in Oxford	Juha Huiskonen	Mon, 9 Dec 2019 14:22:56 +0200	110 lines
Re: Resolution with Tecnai F20	Gabriel Lander	Sat, 7 Dec 2019 09:33:04 -0800	116 lines
Resolution with Tecnai F20	NANIKASHVILI Mika	Sat, 7 Dec 2019 17:06:14 +0000	77 lines
Re: [phenixbb] problems running refinement of shaken model against half map	L. Hielkema	Fri, 6 Dec 2019 19:30:20 +0100	237 lines
Re: FSC getting much worse after particle polishing	Dieter Blaas	Fri, 6 Dec 2019 15:47:06 +0100	193 lines
Re: Refinement in RELION vs Refmac	Takanori Nakane	Fri, 6 Dec 2019 14:13:22 -0000	50 lines
Refinement in RELION vs Refmac	NANIKASHVILI Mika	Fri, 6 Dec 2019 13:59:35 +0000	101 lines
Re: merging two datasets	Humayun Sharif	Thu, 5 Dec 2019 19:03:45 -0500	195 lines
Re: merging two datasets	Takanori Nakane	Thu, 5 Dec 2019 22:54:22 +0000	85 lines
merging two datasets	Humayun Sharif	Thu, 5 Dec 2019 17:37:47 -0500	91 lines
Re: FSC getting much worse after particle polishing	Minglei Zhao	Thu, 5 Dec 2019 14:15:15 -0600	4380 lines
Re: prevent picking in carbon areas	Min Woo Sung	Thu, 5 Dec 2019 11:14:56 -0800	91 lines
Re: prevent picking in carbon areas	RUBEN SANCHEZ GARCIA	Thu, 5 Dec 2019 19:43:47 +0100	65 lines
Re: prevent picking in carbon areas	Brenda Gonzalez	Thu, 5 Dec 2019 17:59:43 +0000	133 lines
prevent picking in carbon areas	Ding, Jienyu (NIH/NCI) [F]	Thu, 5 Dec 2019 12:50:46 -0500	26 lines
Re: LoG auto-picker in Relion3.1	Laurence Pearl	Thu, 5 Dec 2019 14:48:43 +0000	195 lines
Re: LoG auto-picker in Relion3.1	Takanori Nakane	Thu, 5 Dec 2019 14:31:34 -0000	70 lines
LoG auto-picker in Relion3.1	Laurence Pearl	Thu, 5 Dec 2019 14:21:17 +0000	131 lines
Re: CTFFIND4 in Relion	Takanori Nakane	Wed, 4 Dec 2019 21:07:59 +0000	71 lines
Re: Lid for the Talos/Glacio	Wim Hagen	Wed, 4 Dec 2019 21:16:47 +0100	380 lines
Re: CTFFIND4 in Relion	Takanori Nakane	Wed, 4 Dec 2019 20:15:58 +0000	41 lines
Lid for the Talos/Glacio	Claire Atkinson	Wed, 4 Dec 2019 12:05:00 -0800	47 lines
CTFFIND4 in Relion	Joon Park	Wed, 4 Dec 2019 17:56:21 +0000	27 lines
Re: FSC getting much worse after particle polishing	Minglei Zhao	Wed, 4 Dec 2019 11:28:53 -0600	218 lines
Re: FSC getting much worse after particle polishing	Takanori Nakane	Wed, 4 Dec 2019 16:45:45 -0000	176 lines
2nd EMBL Heidelberg CRYO-EM SYMPOSIUM - 7th February 2020	Felix Weis	Wed, 4 Dec 2019 16:42:56 +0000	171 lines
Re: FSC getting much worse after particle polishing	Dieter Blaas	Wed, 4 Dec 2019 17:34:20 +0100	168 lines
Re: [phenixbb] problems running refinement of shaken model against half map	Colin Palmer - UKRI STFC	Wed, 4 Dec 2019 13:40:25 +0000	1223 lines
Re: FSC getting much worse after particle polishing	Takanori Nakane	Wed, 4 Dec 2019 12:53:08 -0000	117 lines
Re: [phenixbb] problems running refinement of shaken model against half map	L. Hielkema	Wed, 4 Dec 2019 11:55:42 +0100	424401 lines
Re: FSC getting much worse after particle polishing	Joseph Atherton	Wed, 4 Dec 2019 10:37:38 +0000	79 lines
FW: Launch of Singapore NRF Fellowship 13th Call (4 Dec 2019 to 28 February 2020)	Sheemei Lok	Wed, 4 Dec 2019 03:36:30 +0000	4828 lines
Re: FSC getting much worse after particle polishing	Minglei Zhao	Tue, 3 Dec 2019 15:08:44 -0600	87 lines
Re: FSC getting much worse after particle polishing	Takanori Nakane	Tue, 3 Dec 2019 20:50:17 +0000	67 lines
Re: FSC getting much worse after particle polishing	Minglei Zhao	Tue, 3 Dec 2019 14:33:00 -0600	64 lines
Re: FSC getting much worse after particle polishing	Minglei Zhao	Tue, 3 Dec 2019 14:31:23 -0600	63 lines
Re: FSC getting much worse after particle polishing	Takanori Nakane	Tue, 3 Dec 2019 20:30:05 +0000	67 lines
FSC getting much worse after particle polishing	Minglei Zhao	Tue, 3 Dec 2019 14:25:47 -0600	6636 lines
Available cryo-EM postdoc/scientist positions at Ernst-Ruska Centre	Sachse, Carsten	Tue, 3 Dec 2019 16:33:23 +0000	248 lines
Using Late-Stage Results to Improve Early-Stage Steps	Dorris, Zachary (NIH/NCI) [V]	Tue, 3 Dec 2019 14:35:28 +0000	101 lines
International School of Crystallography - 55th Course: Structural Drug Design	Scapin, Giovanna	Tue, 3 Dec 2019 14:19:19 +0000	238 lines
Re: Coot & Curlew.	Paul Emsley	Tue, 3 Dec 2019 14:14:03 +0000	39 lines
Re: error in ctfrefine	Takanori Nakane	Tue, 3 Dec 2019 12:02:31 -0000	161 lines
Re: Coot & Curlew.	Michael Swan	Tue, 3 Dec 2019 12:02:03 +0000	290 lines
Re: Coot & Curlew.	Colin Palmer - UKRI STFC	Tue, 3 Dec 2019 11:56:11 +0000	269 lines
Coot & Curlew.	Michael Swan	Tue, 3 Dec 2019 11:41:52 +0000	78 lines
Re: Memory usage in 3D classification/refinement	Russell McFarland	Mon, 2 Dec 2019 22:53:14 +0000	31 lines
Re: Memory usage in 3D classification/refinement	Takanori Nakane	Mon, 2 Dec 2019 22:04:58 +0000	63 lines
Biocurator position opening at RCSB PDB/Rutgers University- Biological Structure Annotation Specialist	Cathy Lawson	Mon, 2 Dec 2019 21:16:39 +0000	315 lines
Memory usage in 3D classification/refinement	Russell McFarland	Mon, 2 Dec 2019 21:10:00 +0000	39 lines
Symmetry in 3D classification and refinement	Mohamed A Sayed	Mon, 2 Dec 2019 20:19:44 +0000	89 lines
Re: Motion Correction Woes	Antony Oliver	Mon, 2 Dec 2019 18:12:56 +0000	104 lines
Re: Motion Correction Woes	Hutchison, Matt (NIH/NCI) [C]	Mon, 2 Dec 2019 15:43:42 +0000	221 lines
Re: Motion Correction Woes	Shawn Zheng	Mon, 2 Dec 2019 07:38:39 -0800	162 lines
Motion Correction Woes	Antony Oliver	Mon, 2 Dec 2019 14:42:18 +0000	57 lines
Motion Correction Woes	Antony Oliver	Mon, 2 Dec 2019 14:34:34 +0000	1051 lines

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December 2019

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