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April 2016

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Subject	From	Date	Size
[git/dials] master: some improvements to the tutorial text (3f356cb)	DIALS Commit via DLS Jenkins	Fri, 29 Apr 2016 16:17:03 +0100	751 lines
[git/dials] master: commenting no longer needed log print part 2 (ca79618)	DIALS Commit via DLS Jenkins	Fri, 29 Apr 2016 11:23:18 +0100	76 lines
[git/dials] master: commenting no longer needed log print (65f7110)	DIALS Commit via DLS Jenkins	Fri, 29 Apr 2016 11:07:32 +0100	135 lines
[git/dials] master: bug fix for reflection viewer, part 2, removing some log outputs (7a77a46)	DIALS Commit via DLS Jenkins	Thu, 28 Apr 2016 14:22:00 +0100	141 lines
[git/dials] master: cleanup dead code (75aeca2)	DIALS Commit via DLS Jenkins	Thu, 28 Apr 2016 12:10:39 +0100	177 lines
[git/dials] master: reorganise output of refined model and number of indexed/unindexed reflections: turns out that the number of unindexed previously reported was not entirely accurate (5617d3f)	DIALS Commit via DLS Jenkins	Thu, 28 Apr 2016 12:10:39 +0100	414 lines
[git/dials] master: remove n_rejects from assign_indices (547a4c4)	DIALS Commit via DLS Jenkins	Thu, 28 Apr 2016 12:10:39 +0100	235 lines
[git/dials] master: remove tutorial script that now bears little resemblance to actual tutorial (7117d65)	DIALS Commit via DLS Jenkins	Thu, 28 Apr 2016 12:10:39 +0100	587 lines
[git/dials] master: also print initial indexed crystal models (7318d91)	DIALS Commit via DLS Jenkins	Thu, 28 Apr 2016 12:10:39 +0100	129 lines
[git/dials] master: include correct command (3282c6f)	DIALS Commit via DLS Jenkins	Thu, 28 Apr 2016 09:58:27 +0100	81 lines
[git/dials] master: some file renames (cf3fb81)	DIALS Commit via DLS Jenkins	Thu, 28 Apr 2016 09:56:31 +0100	111 lines
[git/dials] master: do not literalinclude the import command as we want a generic path (4b43d5b)	DIALS Commit via DLS Jenkins	Thu, 28 Apr 2016 09:48:49 +0100	91 lines
[git/dials] master: deal internally with patterson group symmetry, only convert to provided space group immediately before refinement: fixes #125 (e6bf3c4)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 17:23:21 +0100	295 lines
[git/dials] master: bug fix for reflection viewer, part 1 (288d1dc)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 16:28:46 +0100	318 lines
[git/dials] master: do not literally include literalinclude (7be30fb)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 16:09:33 +0100	80 lines
[git/dials] master: check in current versions of cmds and logs (will be regenerated for the website anyway by Jenkins) (de46bd4)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 16:07:58 +0100	106 lines
[git/dials] master: literalinclude job commands and more logs (9e2dc98)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 16:02:55 +0100	464 lines
[git/dials] master: keep track of more jobs: reindex, static refine and export (1b04b1c)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 15:58:33 +0100	133 lines
[git/dials] master: also keep track of job commands, so these can be literalincluded in the tutorial text as well as the log files (7118d05)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 15:32:37 +0100	277 lines
[git/dials] master: exclude reflections with overload flag set from refinement (7745067)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 14:53:47 +0100	109 lines
[git/dials] master: Updated to use directed distance etc (63915e3)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 14:11:38 +0100	278 lines
[git/dials_scratch] master: Useing get_directed_distance etc (815e421)	DIALS Scratch Commit via DLS Jenkins	Wed, 27 Apr 2016 12:22:50 +0100	174 lines
[git/dials] master: Add directories to autocompletion. Fixes #116 (76aa167)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 12:03:34 +0100	126 lines
[git/dials] master: more intuitive to assume no specfic inclusions means include everything (524e664)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 11:03:29 +0100	116 lines
[git/dials] master: automagically populate phil choice with all the flag names (5f38517)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 11:03:29 +0100	163 lines
[git/dials] master: If no filter is specified, print a table of which flags are present in the input instead (43c591c)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 11:03:29 +0100	179 lines
[git/dials] master: Check for overloads in spot finder (c7acefb)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 10:57:22 +0100	159 lines
[git/dials] master: Fix resolution rings for EIGER, where get_distance() returns negative values. (064328a)	DIALS Commit via DLS Jenkins	Wed, 27 Apr 2016 18:32:09 +0900	79 lines
[git/dials] master: increase tolerance for indexing test (18be81c)	DIALS Commit via DLS Jenkins	Tue, 26 Apr 2016 16:58:06 +0100	97 lines
[git/dials] master: update so it actually does what is written on the webpage (c557a61)	DIALS Commit via DLS Jenkins	Tue, 26 Apr 2016 14:54:28 +0100	168 lines
[git/dials] master: clean up xml output (8141e17)	DIALS Commit via DLS Jenkins	Tue, 26 Apr 2016 10:24:14 +0100	83 lines
[git/dials] master: clean up xml output (8141e17)	DIALS Commit via DLS Jenkins	Tue, 26 Apr 2016 10:24:14 +0100	83 lines
[git/dials] master: bug fix if no scan object (37d526d)	DIALS Commit via DLS Jenkins	Tue, 26 Apr 2016 09:23:16 +0100	88 lines
[git/dials] master: bug fix if no scan object (37d526d)	DIALS Commit via DLS Jenkins	Tue, 26 Apr 2016 09:23:16 +0100	88 lines
[git/dials] master: separate_blocks=False to speed this test up (c170240)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:40:00 +0100	85 lines
[git/dials] master: separate_blocks=False to speed this test up (c170240)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:40:00 +0100	85 lines
[git/dials] master: bug fix (a31f0a4)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	86 lines
[git/dials] master: More info for log (8722177)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	103 lines
[git/dials] master: fix test using old defaults (a7e5b04)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	84 lines
[git/dials] master: if doing stills ensure block_width is None (8713097)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	119 lines
[git/dials] master: increase default block width: tests with https://data.sbgrid.org/dataset/117/ show similar results from block_width=5 all the way up to block_width=50, but small block_widths are a signiifcant overhead for the mcd method (a920db2)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	89 lines
[git/dials] master: more reflections pass outlier rejection now, producing different expected RMSDs for the test (2da1675)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	80 lines
[git/dials] master: New option outlier.separate_blocks=True (default) splits outlier rejection jobs for scans into equal-width phi blocks. Fixes #122 (ee0f5c9)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	532 lines
[git/dials] master: bug fix: cannot call flex.min on an empty array (bbca426)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	82 lines
[git/dials] master: convert outlier vs experiment table to complete outlier vs job in debug log (ae6d738)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	322 lines
[git/dials] master: bug fix (a31f0a4)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	86 lines
[git/dials] master: More info for log (8722177)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	103 lines
[git/dials] master: if doing stills ensure block_width is None (8713097)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	119 lines
[git/dials] master: fix test using old defaults (a7e5b04)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	84 lines
[git/dials] master: increase default block width: tests with https://data.sbgrid.org/dataset/117/ show similar results from block_width=5 all the way up to block_width=50, but small block_widths are a signiifcant overhead for the mcd method (a920db2)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	89 lines
[git/dials] master: more reflections pass outlier rejection now, producing different expected RMSDs for the test (2da1675)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	80 lines
[git/dials] master: New option outlier.separate_blocks=True (default) splits outlier rejection jobs for scans into equal-width phi blocks. Fixes #122 (ee0f5c9)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	532 lines
[git/dials] master: bug fix: cannot call flex.min on an empty array (bbca426)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	82 lines
[git/dials] master: convert outlier vs experiment table to complete outlier vs job in debug log (ae6d738)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 15:39:59 +0100	322 lines
[git/dials] master: Merge pull request #124 from biochem-fan/rs_mapper_fix (0fb8141)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 08:10:22 +0100	54 lines
[git/dials] master: Merge pull request #124 from biochem-fan/rs_mapper_fix (0fb8141)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 08:10:22 +0100	54 lines
[git/dials] master: Added the default output filename to rs_mapper. (c758758)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 09:42:29 +0900	71 lines
[git/dials] master: Added the default output filename to rs_mapper. (c758758)	DIALS Commit via DLS Jenkins	Mon, 25 Apr 2016 09:42:29 +0900	71 lines
[git/dials_scratch] master: Add two new plots of RSMD vs. either panel group or by two theta. (eb96b34)	DIALS Scratch Commit via DLS Jenkins	Fri, 22 Apr 2016 14:22:59 -0700	517 lines
[git/dials] master: Change for constructing stills reflection predictors. (7bc7d43)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:18:38 -0700	139 lines
[git/dials] master: Sync with recent changes (05e1e05)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 10:16:24 -0700	115 lines
[git/dials] master: New Refiner parameter spherical_relp_model=True switches on use of the reflection predictor and its parameterisation for the spherical relp model in stills refinement (does nothing for scans). (89a22e6)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:47:30 +0100	236 lines
[git/dials] master: bug fix (1a4c63d)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:46:30 +0100	78 lines
[git/dials] master: Test both the standard StillsPredictionParameterisation and the new spherical relp version. The analytical derivative calculations for dX/dp and dY/dp are much better in the new version. DeltaPsi derivatives are the same as before (and not that good). (b5186d5)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:14:05 +0100	482 lines
[git/dials] master: Test both the standard StillsPredictionParameterisation and the new spherical relp version. The analytical derivative calculations for dX/dp and dY/dp are much better in the new version. DeltaPsi derivatives are the same as before (and not that good). (b5186d5)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:14:05 +0100	482 lines
[git/dials] master: PredictionParameterisation class for stills with spherical relp assumption (ab17ba2)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:14:04 +0100	1088 lines
[git/dials] master: Fixes (b7e50f8)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:14:04 +0100	202 lines
[git/dials] master: Provide access to SphericalRelpStillsReflectionPredictor within ExperimentsPredictor (52cb58b)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:14:04 +0100	127 lines
[git/dials] master: start refactoring this test to make it easier to apply also to the new model (191ec2b)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:14:04 +0100	1132 lines
[git/dials] master: PredictionParameterisation class for stills with spherical relp assumption (ab17ba2)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:14:04 +0100	1088 lines
[git/dials] master: Fixes (b7e50f8)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:14:04 +0100	202 lines
[git/dials] master: Provide access to SphericalRelpStillsReflectionPredictor within ExperimentsPredictor (52cb58b)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:14:04 +0100	127 lines
[git/dials] master: start refactoring this test to make it easier to apply also to the new model (191ec2b)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 14:14:04 +0100	1132 lines
[git/dials] master: Added some extra checks for file existance (9521492)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 11:01:58 +0100	144 lines
[git/dials] master: Add some excetion messages in dials.import. Fixes #43 (cd27f45)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 10:55:21 +0100	109 lines
[git/dials] master: Added check for dials_regression. Fixes #115. (0d17bfc)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 09:54:35 +0100	104 lines
[git/dials] master: ignore pytest cache directory (a1b107f)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 09:52:42 +0100	62 lines
[git/dials] master: Update test (4d58ec1)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 09:46:50 +0100	81 lines
[git/dials] master: Join streamreader thread when the output of the program is not read in fast enough after termination. (2046159)	DIALS Commit via DLS Jenkins	Thu, 21 Apr 2016 09:28:14 +0100	159 lines
[git/dials] master: Added a command line program to combine found spots. Fixes #115 (6ea7864)	DIALS Commit via DLS Jenkins	Wed, 20 Apr 2016 17:59:54 +0100	1557 lines
[git/dials_scratch] master: Crystal unit cell derivatives d[s1]/dp are also all correct. This completes the required tests because d[s1]/dp for any detector parameter is always (0, 0, 0)^T (890ccb5)	DIALS Scratch Commit via DLS Jenkins	Wed, 20 Apr 2016 16:16:21 +0100	193 lines
[git/dials_scratch] master: Crystal orientation derivatives of s1 are also all correct (750bdd1)	DIALS Scratch Commit via DLS Jenkins	Wed, 20 Apr 2016 16:11:01 +0100	219 lines
[git/dials_scratch] master: Test derivatives in stills_prediction_nave3.pdf. So far only d[s1]/dp for beam parameterisation derivatives is tested. These are all correct. (a51c658)	DIALS Scratch Commit via DLS Jenkins	Wed, 20 Apr 2016 15:14:52 +0100	695 lines
[git/dials] master: only display timeout debug information when timeout functionality is used (43815e8)	DIALS Commit via DLS Jenkins	Wed, 20 Apr 2016 08:58:50 +0100	94 lines
[git/dials] master: DOn't create resolution masker until required. (cbd22e6)	DIALS Commit via DLS Jenkins	Mon, 18 Apr 2016 17:30:58 +0100	175 lines
[git/dials] master: slightly more interesting test using formula in stills_prediction_nave3.pdf (71bc49e)	DIALS Commit via DLS Jenkins	Mon, 18 Apr 2016 16:32:27 +0100	121 lines
[git/dials] master: SphericalRelpStillsReflectionPredictor - stills predictor assuming a spherical relp model and not rotating q to the Ewald sphere. DeltaPsi is still calculated though, to be used as a restraint. (7f74d42)	DIALS Commit via DLS Jenkins	Mon, 18 Apr 2016 16:05:43 +0100	398 lines
[git/dials] master: basic test of the SphericalRelpStillsReflectionPredictor (f835397)	DIALS Commit via DLS Jenkins	Mon, 18 Apr 2016 16:05:43 +0100	135 lines
[git/dials] master: ugly override to force factory function to produce a spherical relp type of stills predictor. Ultimately we need a cleaner way to try out new algorithms like this (perhaps like the plugin system) with choice dictated by the presence of different types of profile model (5bbd8ad)	DIALS Commit via DLS Jenkins	Mon, 18 Apr 2016 16:05:43 +0100	157 lines
[git/dials] master: SphericalRelpStillsRayPredictor: version of StillsRayPredictor for the 'Nave 3' model in which relps are spherical (7eaeb9a)	DIALS Commit via DLS Jenkins	Mon, 18 Apr 2016 16:05:43 +0100	232 lines
[git/dials] master: Fix up values in loops when merging images. (aa1387c)	DIALS Commit via DLS Jenkins	Mon, 18 Apr 2016 11:41:01 +0100	159 lines
[git/dials] master: fix up further CBF fields in dials.merge (0ce72f7)	DIALS Commit via DLS Jenkins	Mon, 18 Apr 2016 10:59:50 +0100	104 lines
[git/dials] master: also compare minimum cells (e79b2a8)	DIALS Commit via DLS Jenkins	Fri, 15 Apr 2016 13:15:08 +0100	163 lines
[git/dials] master: fix comment. init.sh is no more. (f45b83e)	DIALS Commit via DLS Jenkins	Fri, 15 Apr 2016 13:09:55 +0100	72 lines
[git/dials] master: move to dials_scratch for now (d2bb469)	DIALS Commit via DLS Jenkins	Fri, 15 Apr 2016 12:32:48 +0100	791 lines
[git/dials_scratch] master: moved toy utility from dials until it can be improved (d09bac7)	DIALS Scratch Commit via DLS Jenkins	Fri, 15 Apr 2016 12:32:12 +0100	791 lines
[git/dials] master: update links (d5b56be)	DIALS Commit via DLS Jenkins	Thu, 14 Apr 2016 13:26:22 +0100	145 lines
[git/dials] master: fix tutorial text so it matches what is actually done by dev.dials.generate_tutorial_text (aa8b02e)	DIALS Commit via DLS Jenkins	Thu, 14 Apr 2016 10:47:57 +0100	84 lines
[git/dials] master: Add similar radius filter as suggested by Andrew Leslie. Effectively limits the search within a certain radius of the initial beam centre, but improves specificity for real Bijvoet mates (f63c65d)	DIALS Commit via DLS Jenkins	Thu, 14 Apr 2016 10:01:27 +0100	360 lines
[git/dials] master: Use refactored function call so Eigen matrix dimensions can be reported to the log file. (e9b05e5)	DIALS Commit via DLS Jenkins	Wed, 13 Apr 2016 15:45:13 -0700	75 lines
[git/dials] master: remove discover_better_experimental_model option from dials.index (ad638b2)	DIALS Commit via DLS Jenkins	Wed, 13 Apr 2016 14:54:19 +0100	157 lines
[git/dials] master: dials.discover_better_experimental_model: new max_reflections=10000 parameter, use random subset of reflections in analysis for speed (bd64ad2)	DIALS Commit via DLS Jenkins	Wed, 13 Apr 2016 14:42:45 +0100	411 lines
[git/dials] master: add .size() method to flex reflection table (9d432f5)	DIALS Commit via DLS Jenkins	Wed, 13 Apr 2016 10:21:35 +0100	104 lines
[git/dials_scratch] master: Use degrees instead of radians for 2theta plots. Bugfix for uc histogram ranges. (fa7ead1)	DIALS Scratch Commit via DLS Jenkins	Tue, 12 Apr 2016 16:26:06 -0700	220 lines
[git/dials] master: uncommenting two tests in reflection viewer (5d01dda)	DIALS Commit via DLS Jenkins	Tue, 12 Apr 2016 14:16:18 +0100	74 lines
[git/dials] master: sigma_cell= fractional photon to photon change in the unit cell (i.e. unit cell in different crystallites) also Gaussian (7ea66e0)	DIALS Commit via DLS Jenkins	Tue, 12 Apr 2016 03:23:14 +0100	129 lines
[git/dials] master: Allow per-photon change of wavelength: sigma_l=0.01 would be Gaussian with 1% width (5d8529d)	DIALS Commit via DLS Jenkins	Tue, 12 Apr 2016 03:16:20 +0100	122 lines
[git/dials] master: Merge branch 'master' of github.com:dials/dials (0fd4457)	DIALS Commit via DLS Jenkins	Mon, 11 Apr 2016 10:50:19 +0100	52 lines
[git/dials] master: Fixed test with mu (b02bca7)	DIALS Commit via DLS Jenkins	Mon, 11 Apr 2016 10:50:01 +0100	70 lines
[git/dials] master: mu now in mm^-1 instead of cm^-1 (e952689)	DIALS Commit via DLS Jenkins	Mon, 11 Apr 2016 10:23:10 +0100	76 lines
[git/dials] master: Avoid future confusion by updating comment (dbb705c)	DIALS Commit via DLS Jenkins	Mon, 11 Apr 2016 10:18:48 +0100	76 lines
[git/dials] master: Removed factor of 0.1 in DQE because thickness is is mm and attentuation length is in mm-1 rather than cm-1 so t * mu does not need factor of 0.1. (638c4d0)	DIALS Commit via DLS Jenkins	Mon, 11 Apr 2016 09:51:47 +0100	80 lines
[git/dials] master: input degrees, like output of dials.integrate, but use radians in calculation (844ba88)	DIALS Commit via DLS Jenkins	Mon, 11 Apr 2016 08:39:59 +0100	91 lines
[git/dials] master: Accumulate mean result; in case of rt0 is profile cc; other usages could be applied (ba4e8b7)	DIALS Commit via DLS Jenkins	Mon, 11 Apr 2016 08:32:25 +0100	183 lines
[git/dials] master: update download links (a83904e)	DIALS Commit via DLS Jenkins	Mon, 11 Apr 2016 08:00:33 +0100	150 lines
[git/dials] master: reduce compiler optimization level for problematic extension when compiled with latest XCode 7.3 (d99c409)	DIALS Commit via DLS Jenkins	Fri, 8 Apr 2016 17:31:01 +0100	150 lines
[git/dials] master: Move stable release downloads to github - there they won't expire. Reduce number of section headers (0cd3947)	DIALS Commit via DLS Jenkins	Fri, 8 Apr 2016 10:12:09 +0100	203 lines
[git/dials] master: Set the sigma_m, sigma_b parameters (b3b0370)	DIALS Commit via DLS Jenkins	Thu, 7 Apr 2016 20:17:50 +0100	113 lines
[git/dials] master: Allow random selection; set seed to reproduce; set number of random you want -> optimise profile params; usage = dev.dials.duelling_profiles integrated_experiments.json integrated_shoeboxes.pickle.gz method=rt0 min_isum=100 num=20 physics=true debug=true show=true seed=42 (b5feff1)	DIALS Commit via DLS Jenkins	Thu, 7 Apr 2016 20:17:50 +0100	167 lines
[git/dials_scratch] master: Auto scale UC histograms to show 4x standard deviations. (d1ee6d5)	DIALS Scratch Commit via DLS Jenkins	Thu, 7 Apr 2016 09:53:43 -0700	121 lines
[git/dials] master: use approx_equal in test (aa757fc)	DIALS Commit via DLS Jenkins	Thu, 7 Apr 2016 16:43:21 +0100	117 lines
[git/dials_scratch] master: Add histogram and boxplot of per-image RMSDs (a230f83)	DIALS Scratch Commit via DLS Jenkins	Wed, 6 Apr 2016 20:31:40 -0700	140 lines
[git/dials] master: Handle n_macro_cycles=1 (avoid divide by zero). (a273794)	DIALS Commit via DLS Jenkins	Wed, 6 Apr 2016 15:54:25 -0700	93 lines
[git/dials] master: Bugfix (866acfe)	DIALS Commit via DLS Jenkins	Wed, 6 Apr 2016 15:38:19 -0700	77 lines
[git/dials_scratch] master: Bugfixes regarding too few reflections. (44fc3cc)	DIALS Scratch Commit via DLS Jenkins	Wed, 6 Apr 2016 11:36:18 -0700	230 lines
[git/dials] master: Add refinement parameter include_unused_reflections. (f3accb6)	DIALS Commit via DLS Jenkins	Tue, 5 Apr 2016 22:41:49 -0700	212 lines
[git/dials] master: missed another typo on the same line! (c117380)	DIALS Commit via DLS Jenkins	Tue, 5 Apr 2016 16:03:41 +0100	75 lines
[git/dials] master: fix typo (397a3dc)	DIALS Commit via DLS Jenkins	Tue, 5 Apr 2016 15:57:07 +0100	74 lines
[git/dials] master: Proof of concept for an algorithm to search for the beam centre (assuming a single flat panel detector) using the intersection of lines bisecting vectors joining supposed symmetry-related pairs of reflections in detector space. (f3b168a)	DIALS Commit via DLS Jenkins	Tue, 5 Apr 2016 15:57:07 +0100	763 lines
[git/dials] master: ensure that the colour scale is equally centred around zero, i.e. zero is the same colour on all plots (2f6d267)	DIALS Commit via DLS Jenkins	Tue, 5 Apr 2016 15:50:05 +0100	87 lines
[git/dials] master: bug fix (d1ba804)	DIALS Commit via DLS Jenkins	Tue, 5 Apr 2016 13:11:24 +0100	103 lines
[git/dials] master: add ping option to dials.find_spots_client (bdf63f8)	DIALS Commit via DLS Jenkins	Tue, 5 Apr 2016 13:08:18 +0100	93 lines
[git/dials] master: Don't convert a sparse Jacobian to dense during correlation calculation. Convert only two columns at a time to use flex.linear_correlation (ee5308e)	DIALS Commit via DLS Jenkins	Sun, 3 Apr 2016 16:40:27 +0100	139 lines
[git/dials_scratch] master: Add option to exclude outliers. Add plot_difference_vector_norms_histograms. (bbb9d19)	DIALS Scratch Commit via DLS Jenkins	Fri, 1 Apr 2016 20:08:19 -0700	217 lines
[git/dials_scratch] master: Bugfixes for detector_residuals (732ee06)	DIALS Scratch Commit via DLS Jenkins	Fri, 1 Apr 2016 12:38:23 -0700	329 lines
[git/dials] master: use procrunner to generate tutorial text (avoids timeout in Jenkins) (7042805)	DIALS Commit via DLS Jenkins	Fri, 1 Apr 2016 13:46:30 +0100	75 lines
[git/dials] master: Work with fixed dqe (a83fc25)	DIALS Commit via DLS Jenkins	Fri, 1 Apr 2016 08:02:43 +0100	99 lines
[git/dials] master: temp fix while resolving DQE issue; need data processed with update 24140 of FormatCBFFullPilatus.py (ce56d72)	DIALS Commit via DLS Jenkins	Fri, 1 Apr 2016 07:20:30 +0100	90 lines
[git/dials] master: If physics; account for DQE FIXME * DQE very wrong in this example * (8b49e76)	DIALS Commit via DLS Jenkins	Fri, 1 Apr 2016 06:56:57 +0100	91 lines
[git/dials] master: Rough implementation of actual detector physics i.e. general impact of photon not just offset; seems to improve CC of reflection profile in example 29 from 0.9 to 0.96... (6b4c77e)	DIALS Commit via DLS Jenkins	Fri, 1 Apr 2016 06:56:57 +0100	463 lines

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