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October 2019

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Subject	From	Date	Size
[git/dials] master: Prepare branch for DIALS 2.0 release (a0d808a72)	DIALS commit	Wed, 30 Oct 2019 16:46:13 +0000	184 lines
[git/dials] master: use specific revision copy of d_r for tests (e90222384)	DIALS commit	Wed, 30 Oct 2019 16:46:13 +0000	93 lines
[git/dials] master: map_to_minimum_cell in dials.symmetry (14d72cc96)	DIALS commit	Wed, 30 Oct 2019 15:39:35 +0000	737 lines
[git/dials] master: Raise ValueError instead of assert (095564d18)	DIALS commit	Wed, 30 Oct 2019 15:08:33 +0000	200 lines
[git/dials] master: Merge documentation changes (f62728c83)	DIALS commit	Wed, 30 Oct 2019 14:22:13 +0000	136 lines
[git/dials] master: Fix typo in multi-crystal-analysis (64ac853d2)	DIALS commit	Wed, 30 Oct 2019 14:12:07 +0000	120 lines
[git/dials] master: Update multi-lattice tutorial. (149520075)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	82 lines
[git/dials] master: Update using DIALS at diamond tutorial. (0dcc8410f)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	689 lines
[git/dials] master: Remove separate scaling beta lactamase tutorial (4a6b57861)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	487 lines
[git/dials] master: Remove processing in detail tutorial and updates references (9b4f90007)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	1435 lines
[git/dials] master: Remove datablock, debug.log references from betalactamase tutorial. (d71cb3da3)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	381 lines
[git/dials] master: Update betalactamase tutorial - symmetry and scaling. (231c30b39)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	892 lines
[git/dials] master: Workflow - as mentioned in #984 (976f83919)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	71 lines
[git/dials] master: Update multi crystal scaling tutorial (95f798721)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	990 lines
[git/dials] master: Updated DPF3 part 1 tutorial. (02c49f273)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	951 lines
[git/dials] master: Bring multi-crystal (DIALS & BLEND) tutorial up to date for DIALS2.0 (2ca65989b)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	90 lines
[git/dials] master: Changes to DPF3 Part 2 tutorial (84b2ba974)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	538 lines
[git/dials] master: Add metrology corrections and multi-crystal BLEND tutorial to index (ba3352b27)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	89 lines
[git/dials] master: Split tutorials into groups (29c2bacd2)	DIALS commit	Wed, 30 Oct 2019 14:12:06 +0000	145 lines
[git/dials] master: newsfragment corresponding to a16543e9e5db4ea226c7cbe47f7414879fd4866b #991 (07769724b)	DIALS commit	Wed, 30 Oct 2019 12:09:25 +0000	82 lines
[git/dials] master: Major bug fix in output of dials.refine (a16543e9e)	DIALS commit	Wed, 30 Oct 2019 12:01:26 +0000	188 lines
[git/dials] master: Markdown is so much nicer than restructured text. (457664c6f)	DIALS commit	Wed, 30 Oct 2019 09:29:13 +0000	104 lines
[git/dials] master: Keep 1.14 download links (4fc193217)	DIALS commit	Wed, 30 Oct 2019 08:00:25 +0000	156 lines
[git/dials] master: missed a bytes>text conversion instance (980bf7ba9)	DIALS commit	Tue, 29 Oct 2019 10:02:10 +0000	137 lines
[git/dials_data] master: Bump tox from 3.13.2 to 3.14.0 (#120) (90a5c4c)	dials-data commit	Tue, 29 Oct 2019 09:28:41 +0000	100 lines
[git/dials] master: DIALS 2.0 download links (d58215ab7)	DIALS commit	Tue, 29 Oct 2019 09:02:25 +0000	325 lines
[git/dials] master: version function should return a string on Python2 (f88516da7)	DIALS commit	Mon, 28 Oct 2019 14:53:23 +0000	96 lines
[git/dials] master: fix version number determination in Python 3 (cad04f672)	DIALS commit	Mon, 28 Oct 2019 14:28:03 +0000	179 lines
[git/dials] master: add sanity check (426039827)	DIALS commit	Mon, 28 Oct 2019 08:15:46 +0000	88 lines
[git/dials] master: Clean clutter (f37b0db7a)	DIALS commit	Sun, 27 Oct 2019 05:10:33 +0000	203 lines
[git/dials] master: Print out information on output space group in dials.symmetry (f76cb074f)	DIALS commit	Fri, 25 Oct 2019 15:31:18 +0100	360 lines
[git/dials] master: Fix for filter_reflections by d-spacing on spot-finding output (1b3275786)	DIALS commit	Thu, 24 Oct 2019 13:36:36 +0100	399 lines
[git/dials] master: Fix ice_rings.filter on spotfinding results (447041520)	DIALS commit	Wed, 23 Oct 2019 16:18:02 +0100	171 lines
[git/dials] master: Fix test_cosym::test_map_to_minimum_cell on Linux (1e2b189fc)	DIALS commit	Wed, 23 Oct 2019 14:53:49 +0100	136 lines
[git/dials] tag 'v2.0.0' created	DIALS commit	Wed, 23 Oct 2019 14:41:18 +0100	38 lines
[git/dials] master: Towncrier for DIALS 2.0 (f315e4829)	DIALS commit	Wed, 23 Oct 2019 14:40:53 +0100	452 lines
[git/dials] master: fix travis log output [skip ci] (1765fa25a)	DIALS commit	Wed, 23 Oct 2019 09:32:10 +0100	88 lines
[git/dials] master: Cosym fix for mapping to minimum cell (7cfe29acd)	DIALS commit	Tue, 22 Oct 2019 16:50:24 +0100	758 lines
[git/dials] master: Fix bug when eliminating sys absent reflections (abc20e5b0)	DIALS commit	Tue, 22 Oct 2019 15:28:24 +0100	192 lines
[git/dials] master: Fix documentation build errors following #951 (6a31f5091)	DIALS commit	Tue, 22 Oct 2019 09:13:29 +0100	96 lines
[git/dials] master: Add systematic absences checking for dials.symmetry. (#951) (9780dfd90)	DIALS commit	Mon, 21 Oct 2019 16:27:26 +0100	152 lines
[git/dials] master: Remove unused variables from GModelBackgroundCreator (#974) (b6167d847)	DIALS commit	Mon, 21 Oct 2019 15:59:08 +0100	496 lines
[git/dials] master: Document expected exceptions from indexing (6d8503d4b)	DIALS commit	Mon, 21 Oct 2019 12:05:06 +0100	98 lines
[git/dials_scratch] master: Demonstration script for minimum cell problems (d0c0367)	DIALS Scratch commit	Mon, 21 Oct 2019 11:58:25 +0100	180 lines
[git/dials] master: Not Sorry (fb0f9be50)	DIALS commit	Mon, 21 Oct 2019 11:27:56 +0100	163 lines
[git/dials] master: Use imageset_id from input reflections if present (2e2895418)	DIALS commit	Mon, 21 Oct 2019 10:46:08 +0100	162 lines
[git/dials] master: Document expected exceptions from run_dials_refine (0b1ee6e9e)	DIALS commit	Mon, 21 Oct 2019 10:36:53 +0100	91 lines
[git/dials] master: fix test for Python 3 (68b68a50e)	DIALS commit	Mon, 21 Oct 2019 09:50:08 +0100	93 lines
[git/dials] master: Raise error if no target unit cell (065e4693e)	DIALS commit	Sun, 20 Oct 2019 18:43:54 +0100	121 lines
[git/dials] master: Add xfailing test for #977 (e88407d18)	DIALS commit	Sat, 19 Oct 2019 21:09:04 +0100	132 lines
[git/dials] master: Raise error if no target unit cell (fixes #976) (506fb1f96)	DIALS commit	Sat, 19 Oct 2019 18:25:58 +0100	182 lines
[git/dials] master: fix rst syntax error (f5e586018)	DIALS commit	Sat, 19 Oct 2019 12:15:17 +0100	92 lines
[git/dials] master: fix rst syntax error (49ef87fd5)	DIALS commit	Sat, 19 Oct 2019 12:00:04 +0100	84 lines
[git/dials] master: Enable all flake8 checks via precommit and travis (8cccae394)	DIALS commit	Sat, 19 Oct 2019 11:34:01 +0100	129 lines
[git/dials] master: Fix flake8 F401/403/405 warnings (4202427eb)	DIALS commit	Sat, 19 Oct 2019 11:29:08 +0100	1161 lines
[git/dials] master: Remove unnecessary code indirections (27b261b1d)	DIALS commit	Sat, 19 Oct 2019 11:18:34 +0100	1496 lines
[git/dials] master: Remove empty dials_model_serialize_ext (39af3ea4c)	DIALS commit	Sat, 19 Oct 2019 11:18:12 +0100	197 lines
[git/dials] master: Remove unused code (d7cfb6352)	DIALS commit	Sat, 19 Oct 2019 11:17:52 +0100	232 lines
[git/dials] master: Remove volume integrator (#975) (4782f275f)	DIALS commit	Sat, 19 Oct 2019 10:57:51 +0100	806 lines
[git/dials] master: fix flake8 warnings (5550be451)	DIALS commit	Fri, 18 Oct 2019 21:04:06 +0100	196 lines
[git/dials] master: fix undefined name warning (cc12832c6)	DIALS commit	Fri, 18 Oct 2019 20:58:30 +0100	114 lines
[git/dials] master: Clean up util/intensity_explorer.py (c9e5bd673)	DIALS commit	Fri, 18 Oct 2019 20:47:14 +0100	472 lines
[git/dials] master: refactor dials.analyse_output (#973) (42deb812b)	DIALS commit	Fri, 18 Oct 2019 14:46:56 +0100	2598 lines
[git/dials] master: Note that sigma_m is mosaicity (0b502c998)	DIALS commit	Fri, 18 Oct 2019 14:44:26 +0100	98 lines
[git/dials] master: dials.export refactor (#960) (53cabcb98)	DIALS commit	Fri, 18 Oct 2019 10:10:54 +0100	1362 lines
[git/dials] master: If we are deleting scan, gonio, delete their dependencies (f3e80e9fa)	DIALS commit	Thu, 17 Oct 2019 15:47:47 +0100	103 lines
[git/dials] master: Use scan.is_still() (199ed35ff)	DIALS commit	Thu, 17 Oct 2019 15:43:39 +0100	369 lines
[git/dials] master: Add try/except for mpi (e6b656c7b)	DIALS commit	Thu, 17 Oct 2019 07:19:09 -0700	94 lines
[git/dials] master: Refactor index command line program (#967) (a064c5bf4)	DIALS commit	Thu, 17 Oct 2019 14:03:59 +0100	803 lines
[git/dials] master: Correct parametrization for the test (832a96562)	DIALS commit	Thu, 17 Oct 2019 11:57:17 +0100	93 lines
[git/dials] master: Additional clue in plain English (700ad8e15)	DIALS commit	Thu, 17 Oct 2019 11:30:54 +0100	106 lines
[git/dials] master: Add logging (462522216)	DIALS commit	Thu, 17 Oct 2019 11:02:06 +0100	271 lines
[git/dials] master: Handle new imageset/scan still sets in spotfinding (#969) (daaee9051)	DIALS commit	Thu, 17 Oct 2019 10:57:25 +0100	194 lines
[git/dials] master: Skip tests which have been rendered useless by API change (cf21d2a2f)	DIALS commit	Thu, 17 Oct 2019 09:51:51 +0100	110 lines
[git/dials] master: Multiple sequences are almost certainly fine; but leave option (736cc19c8)	DIALS commit	Thu, 17 Oct 2019 06:52:07 +0100	90 lines
[git/dials] master: Replace libtbx.introspection.machine_memory_info with psutil (6874e2fc0)	DIALS commit	Wed, 16 Oct 2019 22:57:06 +0100	954 lines
[git/dials] master: Deduplicate code (111fd9aa5)	DIALS commit	Wed, 16 Oct 2019 20:31:36 +0100	395 lines
[git/dials] master: Be slightly helpful (6d2a057d1)	DIALS commit	Wed, 16 Oct 2019 17:02:24 +0100	136 lines
[git/dials] master: Be less shouty (ac7a94807)	DIALS commit	Wed, 16 Oct 2019 16:49:14 +0100	157 lines
[git/dials] master: retire dials.shout_at_david (fab64c6eb)	DIALS commit	Wed, 16 Oct 2019 15:46:48 +0100	482 lines
[git/dials] master: remove unused/duplicate code (fd43ba639)	DIALS commit	Wed, 16 Oct 2019 12:02:54 +0100	349 lines
[git/dials] master: remove unused import (6df4640b2)	DIALS commit	Wed, 16 Oct 2019 11:29:29 +0100	81 lines
[git/dials] master: Add simple test for scaling reflection selection and intensity choices (688510617)	DIALS commit	Wed, 16 Oct 2019 10:38:28 +0100	237 lines
[git/dials] master: Change free set validation code for scaling. (01225a513)	DIALS commit	Wed, 16 Oct 2019 10:38:28 +0100	2785 lines
[git/dials] master: Implement random selection of minimisation subset for scaling (b559d4cc9)	DIALS commit	Wed, 16 Oct 2019 10:38:28 +0100	330 lines
[git/dials] master: Clean up scaling target function tests (ba857711a)	DIALS commit	Wed, 16 Oct 2019 10:38:28 +0100	1487 lines
[git/dials] master: Scaling code tidying, refactoring and defining scaler interface (953894491)	DIALS commit	Wed, 16 Oct 2019 10:38:27 +0100	111 lines
[git/dials] master: Sweep to sequence (#966) (a9289beb6)	DIALS commit	Tue, 15 Oct 2019 10:35:42 +0100	363 lines
[git/dials] master: Update scaling observers test (a592440ad)	DIALS commit	Tue, 15 Oct 2019 08:55:27 +0100	99 lines
[git/dials] master: Update exclude_images option. (9e38a21a1)	DIALS commit	Mon, 14 Oct 2019 16:43:00 +0100	274 lines
[git/dials] master: Add option to output scaling.html data as json (5da17c502)	DIALS commit	Mon, 14 Oct 2019 16:21:54 +0100	349 lines
[git/dials] master: Update dials.scale help message (745ca5e47)	DIALS commit	Mon, 14 Oct 2019 15:34:31 +0100	238 lines
[git/dials] master: Update scaling guide documenation (0effc0173)	DIALS commit	Mon, 14 Oct 2019 15:34:31 +0100	1116 lines
[git/dials] master: remove stray logging statements (3bd8f6acc)	DIALS commit	Mon, 14 Oct 2019 15:11:28 +0100	155 lines
[git/dials] master: Fix and reinstate normalisation option for dials.symmetry (fixes #919) (712ea2667)	DIALS commit	Mon, 14 Oct 2019 15:08:36 +0100	281 lines
[git/dials] master: Expose lattice_symmetry_max_delta in cosym/symmetry (c15274292)	DIALS commit	Mon, 14 Oct 2019 13:26:35 +0100	172 lines
[git/dials] master: Fix dials.show show_image_stastics for image stacks (957b0c7fb)	DIALS commit	Mon, 14 Oct 2019 12:09:32 +0100	212 lines
[git/dials] master: Change meaning of detector.fix=distance (90ad0e28d)	DIALS commit	Fri, 11 Oct 2019 21:49:55 +0100	112 lines
[git/dials] master: Update test name and description (ec0b160ad)	DIALS commit	Fri, 11 Oct 2019 15:51:08 +0100	176 lines
[git/dials] master: Fix change of basis operation in dials.symmetry (#956) (86cec7fb6)	DIALS commit	Fri, 11 Oct 2019 15:49:37 +0100	389 lines
[git/dials] master: Generate mask from an image. (20770cb4b)	DIALS commit	Thu, 10 Oct 2019 10:58:44 +0100	113 lines
[git/dials] master: Split up tests (9696640ec)	DIALS commit	Wed, 9 Oct 2019 15:54:47 +0100	308 lines
[git/dials] master: Allow detector.fix=distance (aa60c8e57)	DIALS commit	Wed, 9 Oct 2019 12:04:17 +0100	125 lines
[git/dials] master: Handle reflection table API change part deux (e6ce4d68e)	DIALS commit	Wed, 9 Oct 2019 09:55:27 +0100	111 lines
[git/dials] master: Handle reflection table API change (5226b7b6b)	DIALS commit	Wed, 9 Oct 2019 09:52:40 +0100	101 lines
[git/dials] master: Fix scaler_factory test code (59d73b05d)	DIALS commit	Wed, 9 Oct 2019 08:52:17 +0100	107 lines
[git/dials] master: Newsfragment for #955 (6aaef0197)	DIALS commit	Tue, 8 Oct 2019 18:35:03 +0100	80 lines
[git/dials] master: Add test for a dataset with masked module gaps. See #955. (16bbd9e8c)	DIALS commit	Tue, 8 Oct 2019 17:12:27 +0100	169 lines
[git/dials] master: Use a mask from dxtbx in dials.rs_mapper. (#955) (0ab623345)	DIALS commit	Tue, 8 Oct 2019 16:55:59 +0100	499 lines
[git/dials] master: Fix dials.scale targeted scaling, fixes #899 (83be14cc5)	DIALS commit	Tue, 8 Oct 2019 16:32:17 +0100	1201 lines
[git/dials] master: Print help when run without arguments. (1f3cb03fb)	DIALS commit	Tue, 8 Oct 2019 14:24:37 +0100	271 lines
[git/dials] master: Print help when run without arguments. (c4be49c8d)	DIALS commit	Tue, 8 Oct 2019 14:11:41 +0100	138 lines
[git/dials] master: Clean up MTZWriter API. Fixes #958. (1b91d09f6)	DIALS commit	Tue, 8 Oct 2019 13:55:32 +0100	1842 lines
[git/dials] master: remove unused code (#957) (40f6b9829)	DIALS commit	Mon, 7 Oct 2019 21:55:53 +0100	1192 lines
[git/dials] master: Refactor: reduce code duplication (34b5fa913)	DIALS commit	Mon, 7 Oct 2019 20:06:40 +0100	324 lines
[git/dials] master: Address lgtm warning in scaling outlier rejection code (4b63068a7)	DIALS commit	Mon, 7 Oct 2019 15:09:31 +0100	310 lines
[git/dials] master: Clean clutter (fb31158b5)	DIALS commit	Sun, 6 Oct 2019 05:10:28 +0100	104 lines
[git/dials] master: len(refl) == len(list(refl.rows())) == refl.size() (52b28d219)	DIALS commit	Sat, 5 Oct 2019 16:27:30 +0100	94 lines
[git/dials] master: clean up ascii art function after #908 (b22a2e535)	DIALS commit	Sat, 5 Oct 2019 02:17:29 +0100	170 lines
[git/dials] master: Implement html plotting for scaling array model (650d93827)	DIALS commit	Fri, 4 Oct 2019 13:49:28 +0100	971 lines
[git/dials] master: Make reflection tables behave more like 'dict's (#908) (fd110f178)	DIALS commit	Fri, 4 Oct 2019 12:39:00 +0100	1430 lines
[git/dials] master: Drop pyqt from dependencies (58c575f16)	DIALS commit	Fri, 4 Oct 2019 11:49:29 +0100	156 lines
[git/dials_scratch] master: Add some white space clutter (91dfdd3)	DIALS Scratch commit	Fri, 4 Oct 2019 11:17:25 +0100	88 lines
[git/dials_scratch] master: Make it useful: form a histogram of pixel values (f5e745e)	DIALS Scratch commit	Fri, 4 Oct 2019 10:47:11 +0100	328 lines
[git/dials_scratch] master: Laying groundwork for histogram calculation (072844c)	DIALS Scratch commit	Thu, 3 Oct 2019 16:02:54 +0100	198 lines
[git/dials] master: Conda environment definitions for DIALS (52b3fcd98)	DIALS commit	Thu, 3 Oct 2019 15:57:16 +0100	1353 lines
[git/dials] master: Work with a non-windowed backend (456d331e7)	DIALS commit	Thu, 3 Oct 2019 15:18:40 +0100	93 lines
[git/dials] master: update sneak preview version (7b5245606)	DIALS commit	Thu, 3 Oct 2019 12:05:44 +0100	90 lines
[git/dials] master: Allow choice of threshold algorithms (#948) (7a421350e)	DIALS commit	Thu, 3 Oct 2019 10:00:10 +0100	392 lines
[git/dials_scratch] master: Type fixing, no args (d9f43ff)	DIALS Scratch commit	Thu, 3 Oct 2019 08:19:57 +0100	122 lines
[git/dials] master: Simplify usage of flex.reflection_table methods. (#952) (a08d4e068)	DIALS commit	Wed, 2 Oct 2019 17:24:33 +0100	2355 lines
[git/dials] master: Refactor lattice_search sub-module into sub-package (#953) (6083563dc)	DIALS commit	Wed, 2 Oct 2019 17:23:20 +0100	97 lines
[git/dials] master: Fix dials.resolutionizer for mulit-dataset tables + batch ranges (52239cf96)	DIALS commit	Wed, 2 Oct 2019 16:22:00 +0100	167 lines
[git/dials_scratch] master: Update benchmark script to use lattice search method in dials.index (3e228a4)	DIALS Scratch commit	Wed, 2 Oct 2019 10:18:57 +0100	137 lines
[git/dials] master: Fix py3 issue with map, filter in scaling param manager (4f136ffd8)	DIALS commit	Wed, 2 Oct 2019 10:00:41 +0100	194 lines
[git/dials] master: Fix jinja range issue in scaling.html (8b3255366)	DIALS commit	Wed, 2 Oct 2019 09:28:32 +0100	90 lines
[git/dials] master: Headers go at the top (427f01986)	DIALS commit	Tue, 1 Oct 2019 15:08:09 +0100	95 lines
[git/dials] master: Putative fix for #950. (7b8a957f9)	DIALS commit	Mon, 30 Sep 2019 16:46:27 -0700	95 lines

DIALS-COMMIT Archives

October 2019

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