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March 2020


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[git/dials] master: next best place to document this (01c87545f)

DIALS commit

Tue, 31 Mar 2020 15:51:16 +0100

76 lines

[git/dials] master: Consistency in HTML filenames is nice (1604f7e20)

DIALS commit

Tue, 31 Mar 2020 15:46:39 +0100

152 lines

[git/dials] master: Fix typo (4997a0fd0)

DIALS commit

Mon, 30 Mar 2020 12:38:35 +0100

91 lines

[git/dials] master: Cache dispersion threshold debug results. (5ec61edfd)

DIALS commit

Mon, 30 Mar 2020 11:56:45 +0100

308 lines

[git/dials] master: Add test for masking whole panels (78f1e7499)

DIALS commit

Fri, 27 Mar 2020 10:56:19 -0700

120 lines

[git/dials] master: Change default for masking parameter 'untrusted.panel' from 0 to None (32c11c961)

DIALS commit

Fri, 27 Mar 2020 10:56:19 -0700

136 lines

[git/dials] master: Feature for masking: mask out whole panels (d34d46499)

DIALS commit

Fri, 27 Mar 2020 10:56:19 -0700

140 lines

[git/dials] master: Raise exceptions on errors rather than exit (#1209) (ff0024331)

DIALS commit

Fri, 27 Mar 2020 11:15:07 +0000

357 lines

[git/dials] master: Spot threshold as overlay (#1210) (bc1dcb289)

DIALS commit

Fri, 27 Mar 2020 11:03:40 +0000

659 lines

[git/dials] master: add missing newsfragment (bb73b8386)

DIALS commit

Thu, 26 Mar 2020 09:28:49 +0000

74 lines

[git/dials] master: add newsfragment cheat sheet (d1e20222a)

DIALS commit

Thu, 26 Mar 2020 09:27:51 +0000

101 lines

[git/dials] master: connect via SSH even if host key unknown (95fc8f644)

DIALS commit

Thu, 26 Mar 2020 09:04:21 +0000

111 lines

[git/dials] master: OSError is too broad. Revert to None, but maybe be problematic if ssl.SSLError is not available (adc74ed39)

DIALS commit

Wed, 25 Mar 2020 00:37:00 +0000

96 lines

[git/dials] master: Ok, not so simple. Revert "This line will not be reached" (460559525)

DIALS commit

Wed, 25 Mar 2020 00:29:08 +0000

94 lines

[git/dials] master: This line will not be reached (fb2c9d889)

DIALS commit

Wed, 25 Mar 2020 00:09:18 +0000

88 lines

[git/dials] master: unnecessary assignment (lgtm) (9e50cf01f)

DIALS commit

Wed, 25 Mar 2020 00:02:00 +0000

90 lines

[git/dials] master: Remove redundant part of comparisons (lgtm) (82cf11efd)

DIALS commit

Tue, 24 Mar 2020 23:58:52 +0000

131 lines

[git/dials] master: Py3: catching classes that do not inherit from BaseException is not allowed (c32cbb0a0)

DIALS commit

Tue, 24 Mar 2020 23:52:40 +0000

90 lines

[git/dials] master: Fix error flagged by lgtm (c9e1a037a)

DIALS commit

Tue, 24 Mar 2020 23:45:50 +0000

102 lines

[git/dials] master: Unit cell tool (#1192) (4b705a7fb)

DIALS commit

Tue, 24 Mar 2020 18:26:44 +0000

331 lines

[git/dials] master: Raname scaling.html --> dials.scale.html (#1202) (cb4beb341)

DIALS commit

Tue, 24 Mar 2020 18:14:40 +0000

350 lines

[git/dials] master: Fix dials.export mmcif.hklout option (5058b42c5)

DIALS commit

Tue, 24 Mar 2020 11:02:07 +0000

307 lines

[git/dials] master: fix typo (598bb951b)

DIALS commit

Tue, 24 Mar 2020 09:44:52 +0000

93 lines

[git/dials] master: Correct log message. (4475da225)

DIALS commit

Mon, 23 Mar 2020 14:00:43 +0000

100 lines

[git/dials] master: Clean clutter (0fb73c8fa)

DIALS commit

Sun, 22 Mar 2020 05:10:53 +0000

146 lines

[git/dials] master: Override sigma b multiplier (#1195) (8c0ff4986)

DIALS commit

Sat, 21 Mar 2020 06:08:11 +0000

271 lines

[git/dials] master: Merge "Single Panel special cases" (#1182) (33b765d7b)

DIALS commit

Fri, 20 Mar 2020 16:58:29 +0000

92 lines

[git/dials] master: Remove a few more special cases (ca0995baf)

DIALS commit

Fri, 20 Mar 2020 09:44:31 -0700

362 lines

[git/dials] master: Example script to rotate a datablock. (5fc22e504)

DIALS commit

Fri, 20 Mar 2020 09:44:31 -0700

136 lines

[git/dials] master: Disable special cases for single panel images in the image viewer. (99ad5b425)

DIALS commit

Fri, 20 Mar 2020 09:44:31 -0700

452 lines

[git/dials] master: change function name to get_flex_image_multipanel (9aa18414c)

DIALS commit

Fri, 20 Mar 2020 09:44:31 -0700

204 lines

[git/dials] master: More locations that are special cased for single panel detectors (9b8d38927)

DIALS commit

Fri, 20 Mar 2020 09:44:31 -0700

189 lines

[git/dials] master: Redo example file to use experiments instead of datablocks (f17c60d62)

DIALS commit

Fri, 20 Mar 2020 09:44:31 -0700

121 lines

[git/dials] master: taking out the if else blocks for handling single/multi-panel detectors separately; use a general approach instead (925b798cc)

DIALS commit

Fri, 20 Mar 2020 09:44:31 -0700

1157 lines

[git/dials] master: Code review (2d515a334)

DIALS commit

Fri, 20 Mar 2020 09:44:31 -0700

115 lines

[git/dials] master: Remove additional special cases (70dd9731e)

DIALS commit

Fri, 20 Mar 2020 09:44:31 -0700

950 lines

[git/dials] master: flake8 related changes (20d1b6afa)

DIALS commit

Fri, 20 Mar 2020 09:44:31 -0700

229 lines

[git/dials] master: Rename example script (86792eb72)

DIALS commit

Fri, 20 Mar 2020 09:44:31 -0700

197 lines

[git/dials] master: Avoid extra level of indirection when using pickle (5c24eec6c)

DIALS commit

Thu, 19 Mar 2020 09:13:54 +0000

287 lines

[git/dials] master: Handle reflections with intensity exactly 0 (f5084afb3)

DIALS commit

Thu, 19 Mar 2020 06:30:06 +0000

114 lines

[git/dials] master: Add newsfragment (5c07aa8cc)

DIALS commit

Wed, 18 Mar 2020 16:43:30 +0000

77 lines

[git/dials] master: Implement sharing of model parameters in scaling (e6342d94e)

DIALS commit

Wed, 18 Mar 2020 16:43:30 +0000

2507 lines

[git/dials] master: Implement dose-decay scaling model. (ff3ceabd6)

DIALS commit

Wed, 18 Mar 2020 16:43:30 +0000

1895 lines

[git/dials] master: Add option for quadratic resolution dependence (8ccd888e4)

DIALS commit

Wed, 18 Mar 2020 16:43:30 +0000

318 lines

[git/dials] master: Calculate French-Wilson plot using miller array methods. Fixes #1169 (#1194) (afd1fd866)

DIALS commit

Wed, 18 Mar 2020 15:04:18 +0000

371 lines

[git/dials] master: retire last cmp() (4283e35ac)

DIALS commit

Wed, 18 Mar 2020 10:29:23 +0000

125 lines

[git/dials] master: remove cmp() function, #1190 (82902f938)

DIALS commit

Wed, 18 Mar 2020 10:04:51 +0000

143 lines

[git/dials] master: Enable faulthandler by default on Python 3 (692a33f24)

DIALS commit

Mon, 16 Mar 2020 20:36:39 +0000

110 lines

[git/dials] master: Add Python 2 deprecation warning, closes #1179 (b913e6d1b)

DIALS commit

Mon, 16 Mar 2020 09:32:32 +0000

100 lines

[git/dials] master: Recombine partials before scaling. (41c490ec4)

DIALS commit

Mon, 16 Mar 2020 09:10:16 +0000

207 lines

[git/dials] master: Python 3 fixes for dev.dials.csv (b7aaece05)

DIALS commit

Mon, 16 Mar 2020 08:36:38 +0000

124 lines

[git/dials] master: Remove links to Python 2.7 nightly builds (a56cadcaa)

DIALS commit

Sun, 15 Mar 2020 23:20:09 +0000

196 lines

[git/dials] tag 'v2.2.0' created

DIALS commit

Sun, 15 Mar 2020 12:43:07 +0000

38 lines

[git/dials] master: Towncrier for DIALS 2.2 (ae926e7f4)

DIALS commit

Sun, 15 Mar 2020 12:42:12 +0000

579 lines

[git/dials] master: Clean up post-test cache pollution (80b19b3bf)

DIALS commit

Sun, 15 Mar 2020 11:06:38 +0000

105 lines

[git/dials] master: float imports (2ceb0e364)

DIALS commit

Fri, 13 Mar 2020 12:38:25 +0000

187 lines

[git/dials] master: Ignore cosym test iff P622 v P321 (573f74b9d)

DIALS commit

Fri, 13 Mar 2020 10:25:27 +0000

103 lines

[git/dials] master: Update conda environment numpy to 1.16 (80b50b0f1)

DIALS commit

Fri, 13 Mar 2020 10:20:50 +0000

168 lines

[git/dials] master: Add a utility for handling diamond anvil cell data (#1090) (018147c69)

DIALS commit

Fri, 13 Mar 2020 10:13:01 +0000

1532 lines

[git/dials] master: Docstring typo (f38ac9bf2)

DIALS commit

Fri, 13 Mar 2020 09:23:05 +0000

90 lines

[git/dials] master: Wrap cmp with cmp_to_key. Fixes #1190 (7a3cb79a4)

DIALS commit

Wed, 11 Mar 2020 11:24:50 +0000

106 lines

[git/dials] master: Remove print statement (3e404549a)

DIALS commit

Tue, 10 Mar 2020 09:47:24 +0000

92 lines

[git/dials] master: Include text annotations in i_over_sig_i_vs_batch_plot (9dd73c6e9)

DIALS commit

Mon, 9 Mar 2020 22:07:05 +0000

116 lines

[git/dials] master: Add r_pim vs resolution plot to report (46d5dd5c1)

DIALS commit

Mon, 9 Mar 2020 16:54:38 +0000

269 lines

[git/dials] master: Adjust tests accounting for cctbx/cctbx_project#444 (get_top_solutions bugfix) (26d6c649f)

DIALS commit

Mon, 9 Mar 2020 09:40:53 -0700

191 lines

[git/dials] master: Add prefiltering to scaling, to match dials.export filtering (fb9672b91)

DIALS commit

Mon, 9 Mar 2020 14:45:04 +0000

629 lines

[git/dials] master: 2.1 is of course also fine (20c9a0ee1)

DIALS commit

Mon, 9 Mar 2020 12:30:23 +0000

90 lines

[git/dials] master: Respect valid_image_ranges in cosym and dials.symmetry (#1181) (72b41089f)

DIALS commit

Mon, 9 Mar 2020 11:23:31 +0000

401 lines

[git/dials_scratch] master: Clean clutter (1645a36)

DIALS Scratch commit

Sun, 8 Mar 2020 05:10:59 +0000

515 lines

[git/dials] master: Test for id behaviour for stills; for #1180 (b88160f3c)

DIALS commit

Sat, 7 Mar 2020 06:35:38 +0000

154 lines

[git/dials] master: Revert "Check for stills in experiment identifier fixup code in spot finder" (cf2224848)

DIALS commit

Sat, 7 Mar 2020 06:23:54 +0000

106 lines

[git/dials] master: Check for stills in experiment identifier fixup code in spot finder (18ac568de)

DIALS commit

Fri, 6 Mar 2020 08:41:36 -0800

103 lines

[git/dials_scratch] master: Add crude utility to plot refined goniometer angle (ddd6716)

DIALS Scratch commit

Fri, 6 Mar 2020 16:33:03 +0000

315 lines

[git/dials_scratch] master: script to compare intensities from two unmerged mtz files of same experiment (0e90c47)

DIALS Scratch commit

Fri, 6 Mar 2020 16:12:15 +0000

542 lines

[git/dials] master: Use batch_params["id"] instead of iteration counter (ce5910a16)

DIALS commit

Fri, 6 Mar 2020 11:36:21 +0000

129 lines

[git/dials] master: Rename innner loop variable to avoid ambiguity (9e8c71d7c)

DIALS commit

Fri, 6 Mar 2020 11:34:38 +0000

101 lines

[git/dials] master: add python version to output (e28cbf622)

DIALS commit

Fri, 6 Mar 2020 09:28:36 +0000

90 lines

[git/dials] master: Avoid crashing out early on access error (9b2061992)

DIALS commit

Fri, 6 Mar 2020 08:20:40 +0000

112 lines

[git/dials] master: Add dials.damage_analysis for running pychef in dials (#1165) (127d20cee)

DIALS commit

Thu, 5 Mar 2020 10:54:19 +0000

1709 lines

[git/dials] master: Fix test_show.py (84f5e874f)

DIALS commit

Wed, 4 Mar 2020 14:42:02 +0000

166 lines

[git/dials] master: Print image template (#1133) (256f8780f)

DIALS commit

Wed, 4 Mar 2020 13:44:15 +0200

109 lines

[git/dials] master: Avoid HDF5 1.12 for the time being. (b9f790b0b)

DIALS commit

Wed, 4 Mar 2020 11:38:50 +0000

208 lines

[git/dials] master: write a debug log message for cache misses (5bb39bde7)

DIALS commit

Tue, 3 Mar 2020 15:02:28 +0000

86 lines

[git/dials] master: Cache resolution masks per detector/panel (#1177) (f82138faf)

DIALS commit

Tue, 3 Mar 2020 13:53:39 +0000

609 lines

[git/dials] master: Add debug.cProfile as option to dials.stills_process to enable code profiling even in MPI mode (3e2d5cb8d)

DIALS commit

Tue, 3 Mar 2020 06:19:27 +0900

187 lines

[git/dials] master: add newsfragment for #1174 (b945fa84e)

DIALS commit

Mon, 2 Mar 2020 11:58:07 +0000

74 lines

[git/dials_data] master: Bump tox from 3.14.3 to 3.14.5 (#160) (1a22673)

dials-data commit

Sun, 1 Mar 2020 20:43:55 +0000

100 lines

[git/dials_data] master: Bump setuptools from 41.2.0 to 44.0.0 (#158) (3c966a6)

dials-data commit

Sun, 1 Mar 2020 20:43:40 +0000

100 lines

[git/dials] master: If the input experiment has image set which is an instance of ImageSequence, (#1148) (2beb4f5df)

DIALS commit

Sun, 1 Mar 2020 09:44:10 +0000

190 lines

[git/dials] master: Support imagesets of len > 1 (e.g. grid scans) in dials.stills_process (#1174) (b2f023a61)

DIALS commit

Sun, 1 Mar 2020 09:43:25 +0000

200 lines

[git/dials_scratch] master: Clean clutter (4ee49e1)

DIALS Scratch commit

Sun, 1 Mar 2020 05:11:06 +0000

465 lines

[git/dials] master: Clean clutter (bf06a92af)

DIALS commit

Sun, 1 Mar 2020 05:10:54 +0000

110 lines

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