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[git/dials] master: if we say we're skipping the test then actually skip the test (5cc43a93)
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Tue, 28 Feb 2017 13:43:48 +0000 |
76 lines |
[git/dials] master: dials.export_bitmaps: parameters to control compression level for png and jpeg - default compress_level set to 1 for png as much faster than default (6) (9e466fb5)
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Fri, 24 Feb 2017 12:24:12 +0000 |
125 lines |
[git/dials] master: dials.image_viewer add ability to draw untrusted.circle, only if provided on cmdline (ef46c7c7)
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Thu, 23 Feb 2017 14:14:45 +0000 |
385 lines |
[git/dials_scratch] master: add plots to merging stats comparision (7a93d79)
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Wed, 22 Feb 2017 11:50:05 +0000 |
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[git/dials] master: Another try at refining in stills_process. (063db8e2)
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Tue, 21 Feb 2017 09:52:02 -0800 |
569 lines |
[git/dials_scratch] master: fixme (4486405)
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Tue, 21 Feb 2017 15:00:06 +0000 |
76 lines |
[git/dials_scratch] master: Trying to get the processing working with insulin, does not currently; some interesting debugging along the way... (1821f05)
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Tue, 21 Feb 2017 14:58:48 +0000 |
153 lines |
[git/dials] master: Graceful failure when no reflections to print (71ce7a09)
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Tue, 21 Feb 2017 14:28:44 +0000 |
77 lines |
[git/dials] master: Relax restriction that constraints must be between 2 or more parameterisations. Now can lock together, for example, the multiple 'Dist' parameters within a single multi-panel detector parameterisation (23549c2d)
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Tue, 21 Feb 2017 10:17:06 +0000 |
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[git/dials] master: Test a constrained refinement run. Add to run_tests (d2944681)
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Mon, 20 Feb 2017 16:04:43 +0000 |
359 lines |
[git/dials] master: Use constrain_gradient_vector in AdaptLbfgs, add basic test (9c7da64e)
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Mon, 20 Feb 2017 14:57:07 +0000 |
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[git/dials] master: constrain_gradient_vector for LBFGS-based engines (42df83ef)
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Mon, 20 Feb 2017 14:54:50 +0000 |
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[git/dials] master: Allow constraints for scan-varying parameterisations. As long as two or more varying parameterisations have the same number of sample points, then each sample point can be constrained to enforce equal shifts between them. (3fa39332)
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Mon, 20 Feb 2017 14:25:45 +0000 |
211 lines |
[git/dials] master: bug fix for SparseLevMar with constraints (ea5be268)
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Mon, 20 Feb 2017 14:23:52 +0000 |
84 lines |
[git/dials] master: More descriptive name and an accessor for the number of samples of a scan-varying parameterisation (4e95af00)
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Mon, 20 Feb 2017 13:20:46 +0000 |
299 lines |
[git/dials] master: Retire superfluous apply_to_all parameter. If id=None, take this to mean there is no particular selection of experiments to which to apply restraints or constraints, not that they should be applied to no experiments. In that case, apply to all available parameterisations of the relevant type (40e21a0b)
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Mon, 20 Feb 2017 11:20:39 +0000 |
437 lines |
[git/dials] master: Use ConstraintManager in the Refinery to compress and expand parameter vectors and Jacobians for NNLS engines. Use in LBFGS engines to follow later (1e3fa92e)
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Mon, 20 Feb 2017 10:42:31 +0000 |
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[git/dials] master: Fixes to Refinery constructors to accept ConstraintManager objects (6abe67ea)
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Mon, 20 Feb 2017 10:15:23 +0000 |
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[git/dials] master: accessors for the lists of parameterisations of different types (18dbd4d5)
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Mon, 20 Feb 2017 10:15:22 +0000 |
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[git/dials] master: improve interface (567ab735)
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Mon, 20 Feb 2017 10:15:22 +0000 |
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[git/dials] master: RefinerFactory.config_constraints (ff5f51da)
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Mon, 20 Feb 2017 10:15:22 +0000 |
464 lines |
[git/dials] master: dials.image_viewer: respect user-provided mask when calculating thresholding images (73496fe4)
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Fri, 17 Feb 2017 12:11:46 -0800 |
81 lines |
[git/dials] master: dials.image_viewer: re-work untrusted mask generation to re-use code from dials.generate_mask (d13365a5)
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Fri, 17 Feb 2017 12:11:46 -0800 |
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[git/dials_scratch] master: Refactor; need to call refine() (9286b03)
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Thu, 16 Feb 2017 15:06:07 -0800 |
70 lines |
[git/dials_scratch] master: Cherry; to track turbulently spinning crystals (ebb26b5)
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Thu, 16 Feb 2017 15:01:05 -0800 |
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[git/dials_scratch] master: Add ability to load image; find spots; index and refine; for spinning crystal hunt (66d909e)
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Thu, 16 Feb 2017 15:00:39 -0800 |
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[git/dials_scratch] master: Clean clutter (6c32783)
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Thu, 16 Feb 2017 14:59:54 -0800 |
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[git/dials_scratch] master: Start refactoring; add @JMP code for spot finding (673d14b)
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Thu, 16 Feb 2017 14:24:28 -0800 |
251 lines |
[git/dials_scratch] master: Find spots from flex array (635412b)
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Thu, 16 Feb 2017 22:09:14 +0000 |
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[git/dials] master: Added default arg (cc5ae80)
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Thu, 16 Feb 2017 22:08:44 +0000 |
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[git/dials] master: changes required to use constraints when these lengths will differ (55ba817)
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Thu, 16 Feb 2017 15:56:33 +0000 |
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[git/dials] master: functions to constrain dense or sparse Jacobians and test (716bc93)
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Thu, 16 Feb 2017 15:36:28 +0000 |
361 lines |
[git/dials_scratch] master: Add better c.o.m. calculation; unstable if background subtracted; move scale somewhere sensible (44bc8cc)
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Thu, 16 Feb 2017 05:55:29 -0800 |
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[git/dials_scratch] master: Other plotting options; FIXME make this more useful (a373313)
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Thu, 16 Feb 2017 03:54:23 -0800 |
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[git/dials_scratch] master: Record dq in reflections (cb8420d)
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Thu, 16 Feb 2017 03:54:00 -0800 |
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[git/dials_scratch] master: Added pixel masking to reflection pickle; pretty much good to go (3b65b25)
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Wed, 15 Feb 2017 16:32:53 -0800 |
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[git/dials_scratch] master: Remove some cruft (779b3a1)
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Wed, 15 Feb 2017 16:04:04 -0800 |
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[git/dials_scratch] master: Added q_map code from xia2_regression over here; now in self contained (7364ba6)
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Wed, 15 Feb 2017 15:59:55 -0800 |
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[git/dials_scratch] master: Import sys; move stuff to __main__ (7c6f8a4)
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Wed, 15 Feb 2017 15:52:13 -0800 |
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[git/dials_scratch] master: __init__ (455cbcf)
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Wed, 15 Feb 2017 15:50:03 -0800 |
185 lines |
[git/dials_scratch] master: Hacky code from LBL workshop on apple-mode etc integration (64aa418)
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DIALS Scratch Commit via DLS Jenkins |
Wed, 15 Feb 2017 15:19:01 -0800 |
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[git/dials] master: dials.image_viewer: missing update=False (6e2ccd9)
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Wed, 15 Feb 2017 14:49:12 -0800 |
77 lines |
[git/dials] master: dials.image_viewer performance improvements: minimise number of calls to pyslip.Update() (9ac0cfb)
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Wed, 15 Feb 2017 10:23:44 -0800 |
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[git/dials] master: expansion of constrained parameters (8a37c1f)
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Wed, 15 Feb 2017 15:17:21 +0000 |
244 lines |
[git/dials] master: Start development of simple equal shift constraints between parameters of the same type (30b5e3f)
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Wed, 15 Feb 2017 12:22:52 +0000 |
331 lines |
[git/dials] master: Better handle refinement in dials.stills_process (ff76021)
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Tue, 14 Feb 2017 15:19:12 -0800 |
416 lines |
[git/dials] master: dials.image_viewer: move indexer import closer to where it is used (243bb92)
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Tue, 14 Feb 2017 15:16:02 -0800 |
83 lines |
[git/dials] master: parse_args: set timeout for select.select to 0.1 - speeds up startup of dials commands by 0.9s; not clear if this is an optimal value (7fc8bcc)
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Tue, 14 Feb 2017 15:04:30 -0800 |
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[git/dials] master: bug fix (b096a84)
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Tue, 14 Feb 2017 10:43:32 -0800 |
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[git/dials] master: dials.image_viewer: optional refleciton prediction (44b63df)
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Tue, 14 Feb 2017 10:38:50 -0800 |
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[git/dials] master: Also add option to show only indexed spots in image viewer (64261fa)
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Tue, 14 Feb 2017 09:47:30 -0800 |
209 lines |
[git/dials] master: Recommit of @562b9ca, Two changes for processing stills, including update to test (417a257)
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Sun, 12 Feb 2017 22:42:09 +0100 |
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[git/dials] master: Revert "Two changes for processing stills" (77085c9)
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Thu, 9 Feb 2017 15:51:42 +0000 |
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[git/dials] master: bug fix for i_sigi vs z plot (30cad75)
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Thu, 9 Feb 2017 11:12:04 +0000 |
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[git/dials] master: dials.report: set zmin=1 for i_sigi vs xy plots (9436829)
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Thu, 9 Feb 2017 11:11:29 +0000 |
77 lines |
[git/dials] master: If you say log, you mean log10; here we say log but used ln -> think log10 makes more sense to fixed this; scientists expect log10 (d8b1436)
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Thu, 9 Feb 2017 07:09:31 +0000 |
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[git/dials_scratch] master: Added image stack viewer (d207d33)
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Wed, 8 Feb 2017 11:39:01 +0000 |
330 lines |
[git/dials] master: switch off hovermode for stereographic projection plotly output (0a30ea3)
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Wed, 8 Feb 2017 11:19:04 +0000 |
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[git/dials] master: Detect cases where unit cell is not determined by the data (example case has all data in 0, k, l plane for orthorhombic cell meaning a* cannot be refined). Treat these cases with parameter auto_reduction.action = fail/fix/remove (fe5ca54)
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Tue, 7 Feb 2017 15:18:36 +0000 |
220 lines |
[git/dials] master: Added new method for computing sigma_m. Currently experimental (and slow) but used intensities. Can be invoked using sigma_m_algorithm=extended (19120b8)
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Mon, 6 Feb 2017 16:56:57 +0000 |
592 lines |
[git/dials] master: Add callback functions for output (c7232ce)
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Mon, 6 Feb 2017 15:34:15 +0000 |
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[git/dials] master: add environment variable to disable updating .gitversion file (e8c921d)
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Mon, 6 Feb 2017 10:54:37 +0000 |
78 lines |
[git/dials] master: Generate a Python traceback when the normal equations are not linearly independent. Test the condition that all elements of the right hand side are non-zero. Otherwise, the LINALG would fail with a C++ overflow or underflow. (240bdae)
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Fri, 3 Feb 2017 16:56:51 -0800 |
102 lines |
[git/dials] master: Don't presume there will be a match in all files. Fixes #300. (64abe8f)
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Sat, 4 Feb 2017 00:21:01 +0000 |
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[git/dials] master: Two changes for processing stills (562b9ca)
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Fri, 3 Feb 2017 13:00:42 -0800 |
665 lines |
[git/dials] master: Bugfix for when indexing.refinement_protocol.d_min_start is None for the stills indexer (6efbc69)
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Fri, 3 Feb 2017 12:48:44 -0800 |
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[git/dials] master: make it possible to override plot class style in jinja2 template (f5a8713)
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Fri, 3 Feb 2017 15:54:35 +0000 |
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[git/dials] master: Deal with cases where the process terminates but stdout/-err pipes are held open (4d85590)
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Fri, 3 Feb 2017 15:13:36 +0000 |
201 lines |
[git/dials] master: replace Queue with Pipe for signalling, removing implicit background threads and hopefully resolve the NBSR deadlock for good (c936220)
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Fri, 3 Feb 2017 13:55:08 +0000 |
387 lines |
[git/dials] master: A simple example case which reads experiments and reflections; for developer purposes (911f702)
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Fri, 3 Feb 2017 11:41:37 +0000 |
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[git/dials_scratch] master: Testing (d0485c0)
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Thu, 2 Feb 2017 16:26:57 +0000 |
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[git/dials] master: Radial average should take the number of summed images into account (00a42d5)
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Fri, 3 Feb 2017 01:26:10 +0900 |
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[git/dials] master: dials.stereographic_projection: improvements to plotly output (1a3b48c)
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Thu, 2 Feb 2017 10:42:18 +0000 |
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