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February 2020

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Subject	From	Date	Size
[git/dials] master: MPI tweaks for dials.stills_process (00f2c6502)	DIALS commit	Thu, 27 Feb 2020 14:33:02 -0800	986 lines
[git/dials] master: Fix mpi test by using composite_stride so all the results end up in 1 file (298b1481c)	DIALS commit	Thu, 27 Feb 2020 14:33:02 -0800	97 lines
[git/dials] master: Use official scons package (aa145d386)	DIALS commit	Thu, 27 Feb 2020 21:06:57 +0000	254 lines
[git/dials] master: Add option to bootstrap to install Python 3.7/3.8 (278037905)	DIALS commit	Thu, 27 Feb 2020 20:04:58 +0000	1715 lines
[git/dials] master: Fix bug in setting of outliers in scaling. (de3bc8d3f)	DIALS commit	Thu, 27 Feb 2020 16:23:18 +0000	126 lines
[git/dials] master: remove unused dependency (a61e6c83d)	DIALS commit	Thu, 27 Feb 2020 13:44:40 +0000	229 lines
[git/dials] master: Remove confusing change of variables (693d32f9b)	DIALS commit	Tue, 25 Feb 2020 15:40:30 +0000	116 lines
[git/dials_scratch] master: Add first go at scaled intensity explorer (33b010d)	DIALS Scratch commit	Tue, 25 Feb 2020 10:53:23 +0000	627 lines
[git/dials_scratch] master: Use command line parsing, simplify code a little. (f2c4fb0)	DIALS Scratch commit	Tue, 25 Feb 2020 10:53:23 +0000	537 lines
[git/dials] master: Do not use unicode text in exceptions (5bfdc9a66)	DIALS commit	Mon, 24 Feb 2020 16:31:39 +0000	161 lines
[git/dials] master: Python2 does not allow uncaught unicode exceptions (9c139db4b)	DIALS commit	Mon, 24 Feb 2020 16:23:17 +0000	120 lines
[git/dials] master: ensure exception decorator can handle anything (094720091)	DIALS commit	Mon, 24 Feb 2020 16:11:36 +0000	228 lines
[git/dials] master: avoid unused assignment (59e1719ec)	DIALS commit	Mon, 24 Feb 2020 14:43:39 +0000	135 lines
[git/dials] master: fix crash when using relative reference paths (fcf13df23)	DIALS commit	Mon, 24 Feb 2020 13:52:17 +0000	94 lines
[git/dials] master: Clean up dials.array_family.flex (#1158) (030c7068d)	DIALS commit	Mon, 24 Feb 2020 12:23:34 +0000	165 lines
[git/dials] master: Replace 0.5 and 2 with flex.sqrt and flex.pow2 (#1167) (4a359c07a)	DIALS commit	Mon, 24 Feb 2020 10:37:48 +0000	2350 lines
[git/dials] master: clean up source code (009ae0da8)	DIALS commit	Mon, 24 Feb 2020 09:13:50 +0000	495 lines
[git/dials] master: Address lgtm warnings and fix one typo (aa05f0a26)	DIALS commit	Fri, 21 Feb 2020 23:44:16 +0000	854 lines
[git/dials] master: Unskip skipped test (a44579eca)	DIALS commit	Fri, 21 Feb 2020 20:37:19 +0000	177 lines
[git/dials] master: Updated test result as side-effect of 8ce7d8e3 (9ab911081)	DIALS commit	Thu, 20 Feb 2020 14:08:49 +0000	97 lines
[git/dials] master: Fix beam centre search for non-identify fixed rotation (8ce7d8e37)	DIALS commit	Thu, 20 Feb 2020 12:56:12 +0000	227 lines
[git/dials] master: Silence RLV wxAssertionError on Python 3 (78ce7f42a)	DIALS commit	Thu, 20 Feb 2020 11:54:11 +0000	95 lines
[git/dials] master: Fix indexing from known orientation with multi-lattice (#1143) Fixes #1096 (f7c967382)	DIALS commit	Thu, 20 Feb 2020 11:23:45 +0000	248 lines
[git/dials_scratch] master: remove verbosity parameter (ac762e2)	DIALS Scratch commit	Thu, 20 Feb 2020 10:50:41 +0000	95 lines
[git/dials] master: Apparently required for CCP4 build on Windows (32cb92d44)	DIALS commit	Wed, 19 Feb 2020 16:31:11 +0000	82 lines
[git/dials] master: Stabilize search_beam_position (#1160) (563c345f5)	DIALS commit	Wed, 19 Feb 2020 16:04:52 +0000	526 lines
[git/dials] master: Improve error reporting in place of asserts in export MTZ (6b857e974)	DIALS commit	Wed, 19 Feb 2020 11:09:49 +0000	213 lines
[git/dials] master: float some imports (43e7a2461)	DIALS commit	Tue, 18 Feb 2020 08:46:03 +0000	366 lines
[git/dials] master: Make functions imported in other files public (3c1fdf6d8)	DIALS commit	Tue, 18 Feb 2020 08:37:45 +0000	563 lines
[git/dials] master: News from #1157 (b4fd5b3a8)	DIALS commit	Tue, 18 Feb 2020 06:16:16 +0000	75 lines
[git/dials] master: remove conda_required entry (3979f2fed)	DIALS commit	Mon, 17 Feb 2020 15:05:26 +0000	92 lines
[git/dials] master: Temporarily override maximum trusted value in spot finding (#1157) (4b6dfa720)	DIALS commit	Mon, 17 Feb 2020 11:58:14 +0000	1867 lines
[git/dials] master: Refactor search_beam_position (9eb387ea6)	DIALS commit	Mon, 17 Feb 2020 09:08:55 +0000	1417 lines
[git/dials] master: Improve performance of image viewer tile generation. (2a3daecfb)	DIALS commit	Mon, 17 Feb 2020 09:33:06 +0900	144 lines
[git/dials_scratch] master: Update black to 19.10b0 and clean clutter (7f33ee2)	DIALS Scratch commit	Sun, 16 Feb 2020 05:10:56 +0000	87 lines
[git/dials] master: Clean clutter (47822733b)	DIALS commit	Sun, 16 Feb 2020 05:10:42 +0000	130 lines
[git/dials] master: simplify class constructor simplification class (9b77fd645)	DIALS commit	Fri, 14 Feb 2020 11:15:54 +0000	373 lines
[git/dials] master: Remove dead code (679ef4cfa)	DIALS commit	Fri, 14 Feb 2020 10:31:06 +0000	275 lines
[git/dials] master: Slay onions and remove pseudo-classes (d64fbdf81)	DIALS commit	Fri, 14 Feb 2020 10:28:55 +0000	1093 lines
[git/dials_scratch] master: Kill HAL (52d6363)	DIALS Scratch commit	Thu, 13 Feb 2020 12:58:30 +0000	119 lines
[git/dials] master: Update cc half tests (b6bd8a464)	DIALS commit	Wed, 12 Feb 2020 15:05:31 +0000	135 lines
[git/dials] master: Fix subtle bugs with delta cc half algorithm image group exclusion (cf215a3de)	DIALS commit	Wed, 12 Feb 2020 14:41:36 +0000	458 lines
[git/dials] master: Update download links and download-link-script (91bf3f48a)	DIALS commit	Tue, 11 Feb 2020 09:36:56 +0000	256 lines
[git/dials] master: Test composite_output for stills_process (8a8b3c891)	DIALS commit	Mon, 10 Feb 2020 14:00:13 -0800	155 lines
[git/dials] master: Fix experiment.identifier issues, use BytesIO instead of StringIO (86d6ae039)	DIALS commit	Mon, 10 Feb 2020 14:00:13 -0800	197 lines
[git/dials_scratch] master: update pre-commit rules (120ac12)	DIALS Scratch commit	Mon, 10 Feb 2020 11:50:53 +0000	103 lines
[git/dials] master: Update black to 19.10b0 and clean clutter (5234fe619)	DIALS commit	Sun, 9 Feb 2020 05:10:47 +0000	165 lines
[git/dials] master: Fix rl_png broken as side-effect of 7879db4 (fb6b45de0)	DIALS commit	Fri, 7 Feb 2020 16:00:40 +0000	156 lines
[git/dials] master: Use first 360 degrees of data for dials.symmetry. Fixes #1000 (#1116) (2f3829946)	DIALS commit	Fri, 7 Feb 2020 15:59:49 +0000	496 lines
[git/dials] master: Update search_beam_centre to use experiments (#1145) (7879db4c1)	DIALS commit	Fri, 7 Feb 2020 13:59:50 +0000	2014 lines
[git/dials] master: Remove print statements. Sorry. (17f1fd169)	DIALS commit	Fri, 7 Feb 2020 10:58:37 +0000	106 lines
[git/dials] master: print(flush=..) was never backported to 2.7 (20b4464b6)	DIALS commit	Fri, 7 Feb 2020 10:48:52 +0000	189 lines
[git/dials] master: Fix id resetting for certain multi dataset combinations (83bf04781)	DIALS commit	Fri, 7 Feb 2020 10:46:05 +0000	169 lines
[git/dials] master: Add test to catch bug in sort tables. (3d30612e7)	DIALS commit	Fri, 7 Feb 2020 10:44:42 +0000	121 lines
[git/dials] master: Fix exclude_datasets option to accept ints. Fixes #1146 (a294f52ce)	DIALS commit	Thu, 6 Feb 2020 16:48:10 +0000	107 lines
[git/dials] master: spellchek (e568c851e)	DIALS commit	Thu, 6 Feb 2020 16:13:07 +0000	101 lines
[git/dials] master: update installer links (88fe0ec0e)	DIALS commit	Thu, 6 Feb 2020 15:21:46 +0000	191 lines
[git/dials] master: Ensure restraints are not considered for fixed parameterisations (#1144) (5aa1ccf1f)	DIALS commit	Thu, 6 Feb 2020 13:29:53 +0000	428 lines
[git/dials] master: remove accidentally added print (df3e4f25b)	DIALS commit	Wed, 5 Feb 2020 14:58:02 +0000	87 lines
[git/dials] master: Make bootstrap run with Python 3 (2cfc11a6e)	DIALS commit	Wed, 5 Feb 2020 14:44:25 +0000	478 lines
[git/dials] master: Fix lgtm warnings in scale.py (120960c47)	DIALS commit	Wed, 5 Feb 2020 14:21:30 +0000	180 lines
[git/dials] master: Ensure output experiments in same order as input. For #1120 (bf7719410)	DIALS commit	Wed, 5 Feb 2020 13:47:25 +0000	233 lines
[git/dials] master: Fix test failure after #1134 (68e5d774c)	DIALS commit	Wed, 5 Feb 2020 13:16:42 +0000	109 lines
[git/dials] master: Add table of image ranges for each dataset to output report. (#1134) (2213e2635)	DIALS commit	Wed, 5 Feb 2020 11:58:37 +0000	543 lines
[git/dials] master: Fix 1030: keep goniometers and scans around if provided in input (#1076) (d4251a1e0)	DIALS commit	Wed, 5 Feb 2020 11:50:55 +0000	234 lines
[git/dials] master: Fast masking (#1084) (8a6bc443e)	DIALS commit	Wed, 5 Feb 2020 11:47:04 +0000	167 lines
[git/dials] master: Exploit improved CCTBX 'counting_sorted' binning algorithm (#1130) (6f8009988)	DIALS commit	Wed, 5 Feb 2020 11:35:11 +0000	286 lines
[git/dials] master: Fix shoebox memory usage check (#1121) (ebfd0fce1)	DIALS commit	Wed, 5 Feb 2020 11:18:23 +0000	584 lines
[git/dials] master: Use entry points to enumerate DIALS extensions (838e9af84)	DIALS commit	Wed, 5 Feb 2020 11:18:05 +0000	419 lines
[git/dials] master: fix test: stdout is binary data (8631c9b6f)	DIALS commit	Wed, 5 Feb 2020 07:51:25 +0000	100 lines
[git/dials] master: Don't write NX_class for dials key as NXdials. See #1124 (e000c2e6b)	DIALS commit	Tue, 4 Feb 2020 16:18:47 -0800	106 lines
[git/dials] master: Don't use subentry for NXreflections. See nexusformat/definitions#752 (f32e402af)	DIALS commit	Tue, 4 Feb 2020 16:18:47 -0800	179 lines
[git/dials] master: Fix per image analysis for grid scans (#1131) (784b52e2e)	DIALS commit	Tue, 4 Feb 2020 17:32:31 +0000	2414 lines
[git/dials] master: Two more Exception.message (994419f62)	DIALS commit	Tue, 4 Feb 2020 11:58:55 +0000	133 lines
[git/dials] master: Bug fix: don't use the message attribute (3872da057)	DIALS commit	Tue, 4 Feb 2020 11:56:58 +0000	113 lines
[git/dials] master: only import matplotlib when actually plotting (7311daab7)	DIALS commit	Tue, 4 Feb 2020 10:58:46 +0000	137 lines
[git/dials] master: Update expectation values since cctbx/cctbx#435 (3d455a301)	DIALS commit	Tue, 4 Feb 2020 10:50:42 +0000	121 lines
[git/dials] master: fix broken exception message (e97b2d4fe)	DIALS commit	Tue, 4 Feb 2020 10:20:15 +0000	140 lines
[git/dials] master: remove unused imports, variables (f5ecfe212)	DIALS commit	Tue, 4 Feb 2020 10:18:25 +0000	113 lines
[git/dials] master: remove unnecessary print() (67b4da36e)	DIALS commit	Tue, 4 Feb 2020 10:12:19 +0000	221 lines
[git/dials] master: Fix DeltaCCHalf test (0da0edfac)	DIALS commit	Tue, 4 Feb 2020 09:43:23 +0000	311 lines
[git/dials] master: Don't create quitting exception and then continue (c024d5ae2)	DIALS commit	Tue, 4 Feb 2020 07:48:36 +0000	124 lines
[git/dials] master: Refactor compute_delta_cchalf, add tests (67ad7ecda)	DIALS commit	Mon, 3 Feb 2020 16:40:05 +0000	96 lines
[git/dials] master: Add back old test, fix issue (4785e3b9a)	DIALS commit	Mon, 3 Feb 2020 16:40:05 +0000	217 lines
[git/dials] master: Rework dials.compute_delta_cchalf to fix issues. Fixes #852 (8d0800bd8)	DIALS commit	Mon, 3 Feb 2020 16:40:05 +0000	2422 lines
[git/dials] master: News (a6119127d)	DIALS commit	Mon, 3 Feb 2020 12:04:12 +0000	74 lines
[git/dials] master: Use signed int here (f3a928b57)	DIALS commit	Mon, 3 Feb 2020 12:02:15 +0000	105 lines
[git/dials] master: Add test for cctbx/dxtbx#133 (4fbe8c3a6)	DIALS commit	Mon, 3 Feb 2020 09:01:41 +0000	115 lines
[git/dials] master: Be careful with types (07bcb3ca3)	DIALS commit	Mon, 3 Feb 2020 08:58:18 +0000	114 lines
[git/dials] master: Clean clutter (5d87505dc)	DIALS commit	Sun, 2 Feb 2020 05:10:51 +0000	143 lines
[git/dials_data] master: Bump pip from 19.3.1 to 20.0.2 (#155) (1af3028)	dials-data commit	Sat, 1 Feb 2020 19:59:33 +0000	98 lines
[git/dials_data] master: Bump pyyaml from 5.1.2 to 5.3 (#153) (4cae311)	dials-data commit	Sat, 1 Feb 2020 19:59:21 +0000	118 lines
[git/dials_data] master: We still support Python 2.7 (#156) (64b1b45)	dials-data commit	Sat, 1 Feb 2020 19:45:27 +0000	127 lines
[git/dials_data] master: Bump wheel from 0.33.6 to 0.34.2 (#152) (7f59d99)	dials-data commit	Sat, 1 Feb 2020 19:31:08 +0000	81 lines
[git/dials_data] master: Bump six from 1.13.0 to 1.14.0 (#150) (d5f386b)	dials-data commit	Sat, 1 Feb 2020 19:31:02 +0000	117 lines
[git/dials_data] master: Bump py from 1.8.0 to 1.8.1 (#145) (5894de1)	dials-data commit	Sat, 1 Feb 2020 18:56:25 +0000	117 lines
[git/dials_data] master: Bump wheel from 0.33.6 to 0.34.2 (c260459)	dials-data commit	Sat, 1 Feb 2020 18:47:50 +0000	96 lines
[git/dials_data] master: Bump tox from 3.14.1 to 3.14.3 (#144) (8cea83f)	dials-data commit	Sat, 1 Feb 2020 18:46:23 +0000	100 lines
[git/dials_data] master: Bump pytest from 4.6.6 to 4.6.9 (#149) (6db4dd5)	dials-data commit	Sat, 1 Feb 2020 18:45:22 +0000	121 lines

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February 2020

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