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Subject	From	Date	Size
Jenkins 5a cctbx Tests build 3678 Still Unstable	Jenkins Build Server (Diamond)	Fri, 30 Dec 2016 03:33:49 +0000	804 lines
[git/cctbx] master: First pass at a script to analyze the results of dials.stills_process and plot statisitics (hitfinding and I/sigma) over time using the xfel gui interfaces. (61c0185)	CCTBX Commit via DLS Jenkins	Thu, 29 Dec 2016 16:12:46 -0800	340 lines
[git/cctbx] master: added a single wizard test (54ce97d)	CCTBX Commit via DLS Jenkins	Thu, 22 Dec 2016 20:55:37 -0800	83 lines
[git/cctbx] master: fall back position if bond params table is out of date... 🇦🇺 (65bd97e)	CCTBX Commit via DLS Jenkins	Thu, 22 Dec 2016 15:16:16 -0800	84 lines
[git/cctbx] master: fix failing tests (5da71fa)	CCTBX Commit via DLS Jenkins	Thu, 22 Dec 2016 15:14:57 -0800	332 lines
[git/cctbx] master: Loop closure in opposite direction (3648319)	CCTBX Commit via DLS Jenkins	Thu, 22 Dec 2016 13:56:16 -0800	1243 lines
[git/cctbx] master: add add_hydrogens option (49152e3)	CCTBX Commit via DLS Jenkins	Thu, 22 Dec 2016 11:26:19 -0800	416 lines
[git/cctbx] master: adding output_prefix parameter to secondary_structure_restraints. (22b8fdd)	CCTBX Commit via DLS Jenkins	Thu, 22 Dec 2016 10:24:17 -0800	99 lines
[git/cctbx] master: Make this run fast (7f795a8)	CCTBX Commit via DLS Jenkins	Thu, 22 Dec 2016 09:42:18 -0800	135 lines
[git/cctbx] master: Rationalize, enhance tests and remove plenty of bugs (9304cc8)	CCTBX Commit via DLS Jenkins	Thu, 22 Dec 2016 08:04:01 -0800	2421 lines
[git/cctbx] master: Optimize radius for map CC (52e0071)	CCTBX Commit via DLS Jenkins	Thu, 22 Dec 2016 07:38:27 -0800	80 lines
[git/cctbx] master: Merge branch 'master' of github.com:cctbx/cctbx_project (b8c3673)	CCTBX Commit via DLS Jenkins	Thu, 22 Dec 2016 07:37:01 -0800	335 lines
[git/cctbx] master: Bug fix (755837f)	CCTBX Commit via DLS Jenkins	Thu, 22 Dec 2016 07:36:41 -0800	77 lines
[git/cctbx] master: Autosharpen: added sharpening_info object as an output for the GUI (98aecca)	CCTBX Commit via DLS Jenkins	Wed, 21 Dec 2016 15:58:41 -0800	82 lines
[git/cctbx] master: try again to update maptbx (7884461)	CCTBX Commit via DLS Jenkins	Wed, 21 Dec 2016 13:35:12 -0700	886 lines
[git/cctbx] master: introducing ignore_ncs parameter to MI (f5ac46c)	CCTBX Commit via DLS Jenkins	Tue, 20 Dec 2016 16:17:04 -0800	231 lines
[git/cctbx] master: Bug fixes (8c8499d)	CCTBX Commit via DLS Jenkins	Tue, 20 Dec 2016 09:38:43 -0800	353 lines
[git/cctbx] master: Work in progress; full metrology powered model for I19 (78f11c8)	CCTBX Commit via DLS Jenkins	Tue, 20 Dec 2016 06:19:28 +0000	553 lines
[git/cctbx] master: hiding more output to debug in MI (c6fc0c2)	CCTBX Commit via DLS Jenkins	Mon, 19 Dec 2016 17:06:37 -0800	87 lines
[git/cctbx] master: Merge pull request #7 from cctbx/test-output (979b048)	CCTBX Commit via DLS Jenkins	Mon, 19 Dec 2016 08:24:47 -0800	55 lines
[git/cctbx] master: New command libtbx.git_avoid_merges (04964a7)	CCTBX Commit via DLS Jenkins	Mon, 19 Dec 2016 12:45:37 +0000	229 lines
[git/cctbx] master: ignore notifier log (760711a)	CCTBX Commit via DLS Jenkins	Mon, 19 Dec 2016 09:15:25 +0000	67 lines
[git/cctbx] master: Bugfix (8eeaf9c)	CCTBX Commit via DLS Jenkins	Sun, 18 Dec 2016 19:24:48 -0800	73 lines
[git/cctbx] master: First round (ecd83d0)	CCTBX Commit via DLS Jenkins	Fri, 16 Dec 2016 16:10:04 -0800	390 lines
[git/cctbx] master: moving map reading out of class (4f36923)	CCTBX Commit via DLS Jenkins	Fri, 16 Dec 2016 14:47:07 -0800	331 lines
[git/cctbx] master: initial working user map (847be5e)	CCTBX Commit via DLS Jenkins	Fri, 16 Dec 2016 14:47:07 -0800	205 lines
[git/cctbx] master: use crystal symmetry from input (8ce8334)	CCTBX Commit via DLS Jenkins	Fri, 16 Dec 2016 14:47:07 -0800	130 lines
[git/cctbx] master: fix cc_one_half_sigma_tau calculation after clarification from Kay: calculation should use only the intensities - i.e. we need the average of the "internal" variance of the intensities (ecd392f)	CCTBX Commit via DLS Jenkins	Fri, 16 Dec 2016 21:27:21 +0000	275 lines
[git/cctbx] master: reordering output so overall stats are at the end, thus visible in command-line without scrolling (956ed36)	CCTBX Commit via DLS Jenkins	Fri, 16 Dec 2016 11:43:23 -0800	134 lines
[git/cctbx] master: Merge branch 'master' of github.com:cctbx/cctbx_project (4ab6bd6)	CCTBX Commit via DLS Jenkins	Fri, 16 Dec 2016 17:56:55 +0000	465 lines
[git/cctbx] master: Get largest tncs order by counting which chain id occurs the most often. Added quiet keyword (b84ce92)	CCTBX Commit via DLS Jenkins	Fri, 16 Dec 2016 17:50:46 +0000	215 lines
[git/cctbx] master: Added multi_core_run() which is an adapted version of example in Computational Crystallography Newsletter (2013). 4, p21. Unlike parallel_map() this continues running any remaining child jobs if one or more child jobs dies with a segmentation fault. (9a9eb9f)	CCTBX Commit via DLS Jenkins	Fri, 16 Dec 2016 17:32:58 +0000	227 lines
[git/cctbx] master: Merge branch 'master' of https://github.com/cctbx/cctbx_project (bf6e993)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 16:22:54 -0800	57 lines
[git/cctbx] master: Must import wx inside try...except for the benefit of developers working off a graphics-free build. In which case we don't want to fail on the configure...make step that imports this module. (df280e4)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 16:20:23 -0800	84 lines
[git/cctbx] master: FEM: make a phil parameter visible in the GUI (77d889e)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 15:24:57 -0800	77 lines
[git/cctbx] master: cleanup (9333272)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 11:58:31 -0800	110 lines
[git/cctbx] master: introducing debug option to suppress creation of intermediate files. (7836532)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 11:58:31 -0800	462 lines
[git/cctbx] master: cleanup (695f897)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 11:58:08 -0800	112 lines
[git/cctbx] master: add more comments (a4aafe2)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 11:44:07 -0800	305 lines
[git/cctbx] master: Merge branch 'cluster_threes' (640af44)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 03:51:33 -0800	49 lines
[git/cctbx] master: Neede for QR (d7e0f16)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 03:39:44 -0800	91 lines
[git/cctbx] master: Revert "Merge branch 'cluster_threes'" (bde31ac)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 03:30:39 -0800	367 lines
[git/cctbx] master: Merge branch 'cluster_threes' (60feccd)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 03:25:43 -0800	54 lines
[git/cctbx] master: added a simple splitting function (7e00e81)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 02:19:17 -0800	91 lines
[git/cctbx] master: Merge branch 'master' into cluster_threes (2869a72)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 01:58:00 -0800	116 lines
[git/cctbx] master: iotbx.cbf_read: don't be so strict on expected datablock name (6ac3e0b)	CCTBX Commit via DLS Jenkins	Thu, 15 Dec 2016 09:30:01 +0000	79 lines
[git/cctbx] master: XFEL UI (aa9d899)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 18:04:24 -0800	108 lines
[git/cctbx] master: starting better threes generation (b2df33a)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 17:43:35 -0800	294 lines
[git/cctbx] master: Reorganize code. Add flag_hush. - Use flag_hush to disable disc and stats operations. Code should run faster! (9e19cbc)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 16:33:30 -0800	78 lines
[git/cctbx] master: bug fix (9a82b09)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 15:14:22 -0800	75 lines
[git/cctbx] master: Meant to use BYTE_OFFSET (b63fe72)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 15:10:06 -0800	75 lines
[git/cctbx] master: molprobity GUI: re-enabled functionality for centering on residue in Coot for multi-criterion plot (0801e6d)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 15:08:53 -0800	209 lines
[git/cctbx] master: XFEL UI (35b8af9)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 14:06:47 -0800	445 lines
[git/cctbx] master: print error message if there are no map coefficients in mtz file (f6db731)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 13:54:06 -0800	80 lines
[git/cctbx] master: Rolling over clashscore improvements. (1482e79)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 12:41:09 -0800	51 lines
[git/cctbx] master: cleanup (748637b)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 09:43:54 -0800	73 lines
[git/cctbx] master: Putative fix for pubmed lookups (7297fcd)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 13:57:10 +0000	75 lines
[git/cctbx] master: Clean up default output by removing massive 'ERROR' and 'RETURN' blocks which may be false positives (a466d41)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 09:51:24 +0000	121 lines
[git/cctbx] master: Add quantifiedcode badge. Not hosted on SF ; ) (4772032)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 07:46:20 +0000	139 lines
[git/cctbx] master: Changes to as_file() after code review. Must use BYTE_OFFSET (only decompression currently supported in this class, or by program XDS. Must have non-zero thickness in order for default pixel_to_mm strategy to work. (fcf0cf5)	CCTBX Commit via DLS Jenkins	Tue, 13 Dec 2016 19:59:57 -0800	255 lines
[git/cctbx] master: XFEL UI (5ba5002)	CCTBX Commit via DLS Jenkins	Tue, 13 Dec 2016 17:36:57 -0800	92 lines
[git/cctbx] master: Add plot_x_max and normalize as options for dxtbx.radial_average (7531edc)	CCTBX Commit via DLS Jenkins	Tue, 13 Dec 2016 17:22:19 -0800	123 lines
[git/cctbx] master: small bugfix (82d7f0f)	CCTBX Commit via DLS Jenkins	Tue, 13 Dec 2016 17:15:53 -0800	80 lines
[git/cctbx] master: new dicts (c9b70f9)	CCTBX Commit via DLS Jenkins	Tue, 13 Dec 2016 17:03:42 -0800	287 lines
[git/cctbx] master: Add a README file (a554c27)	CCTBX Commit via DLS Jenkins	Wed, 14 Dec 2016 01:58:44 +0100	164 lines
[git/cctbx] master: merge similar line processing (84cd107)	CCTBX Commit via DLS Jenkins	Tue, 13 Dec 2016 16:44:33 -0800	341 lines
[git/cctbx] master: separate the worst code into function (4814611)	CCTBX Commit via DLS Jenkins	Tue, 13 Dec 2016 16:12:53 -0800	158 lines
[git/cctbx] master: changed clashscore outputs so that Overlap values always display as positive numbers (512b52f)	CCTBX Commit via DLS Jenkins	Tue, 13 Dec 2016 15:08:28 -0500	236 lines
[git/cctbx] master: I thought I committed this... (313a627)	CCTBX Commit via DLS Jenkins	Tue, 13 Dec 2016 03:46:33 -0800	104 lines
[git/cctbx] master: Merge branch 'master' into q_r_features (62bd1ba)	CCTBX Commit via DLS Jenkins	Tue, 13 Dec 2016 02:52:33 -0800	137 lines
[git/cctbx] master: Merge pull request #6 from cctbx/xfel_ui_dials_fixes_dec2016 (02d6830)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 20:59:37 -0800	70 lines
[git/cctbx] master: XFEL UI: Hook up droplet hit finder to DIALS backend and parameterize it in the GUI (71cb87e)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 20:44:48 -0800	707 lines
[git/cctbx] master: added function as_file() to write out miniCBF images plan is to do this for all formats (90359f4)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 17:55:06 -0800	283 lines
[git/cctbx] master: Typo (5c6b24e)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 17:19:00 -0800	414 lines
[git/cctbx] master: Initial working version (ed6462d)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 16:44:30 -0800	689 lines
[git/cctbx] master: XFEL UI (4bf3fd5)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 16:06:45 -0800	169 lines
[git/cctbx] master: XFEL UI (db0e371)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 15:26:34 -0800	168 lines
[git/cctbx] master: initial commit for a new tool: validation of SS annotations. (13e7bbc)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 15:17:48 -0800	60 lines
[git/cctbx] master: XFEL DB (5e45dae)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 14:18:02 -0800	147 lines
[git/cctbx] master: IOTA v1.0.014 - Bringing back clustering; bugfixes (89375e7)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 13:49:52 -0800	2792 lines
[git/cctbx] master: XFEL UI (69a3080)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 12:32:14 -0800	178 lines
[git/cctbx] master: Boundary check (f8e25f0)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 11:42:13 -0800	101 lines
[git/cctbx] master: More check_format=False when reading experiment lists to speed up plots (417f421)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 11:28:20 -0800	103 lines
[git/cctbx] master: For dials refinement in labelit backend of cctbx.xfel, add option 'fix', in addition to detector and wavelength. If set, detector and wavelength will both be fixed during refinement. (f79b97c)	CCTBX Commit via DLS Jenkins	Mon, 12 Dec 2016 11:10:39 -0800	139 lines
[git/cctbx] master: Merge branch 'master' into q_r_features (e01b6de)	CCTBX Commit via DLS Jenkins	Sun, 11 Dec 2016 20:40:00 -0800	96 lines
[git/cctbx] master: Add performance tracking module. (2b59622)	CCTBX Commit via DLS Jenkins	Fri, 9 Dec 2016 17:49:13 -0800	87 lines
[git/cctbx] master: Update input (a83edb8)	CCTBX Commit via DLS Jenkins	Fri, 9 Dec 2016 17:48:24 -0800	439 lines
[git/cctbx] master: Merge branch 'master' of https://github.com/cctbx/cctbx_project (391fe5c)	CCTBX Commit via DLS Jenkins	Fri, 9 Dec 2016 18:36:13 -0500	81 lines
[git/cctbx] master: default clashscore run now uses NOVDWOUT flag with Probe to decrease Probe output for faster parsing, attempted to maintain availability of full Probe output for a possible Coot interaction (451a1a7)	CCTBX Commit via DLS Jenkins	Fri, 9 Dec 2016 18:35:39 -0500	235 lines
[git/cctbx] master: minor changes (a535326)	CCTBX Commit via DLS Jenkins	Fri, 9 Dec 2016 15:18:49 -0800	287 lines
[git/cctbx] master: adapt tests (de1cc99)	CCTBX Commit via DLS Jenkins	Fri, 9 Dec 2016 14:15:16 -0800	332 lines
[git/cctbx] master: adapt riding H manager (ad51bff)	CCTBX Commit via DLS Jenkins	Fri, 9 Dec 2016 14:10:49 -0800	195 lines
[git/cctbx] master: adapt parameterization to changes in connectivitiy (41f65c3)	CCTBX Commit via DLS Jenkins	Fri, 9 Dec 2016 13:58:41 -0800	2109 lines
[git/cctbx] master: making code faster (febbd84)	CCTBX Commit via DLS Jenkins	Fri, 9 Dec 2016 13:27:36 -0800	1998 lines
[git/cctbx] master: Pretty up dxtbx.radial_average a bit (0272acd)	CCTBX Commit via DLS Jenkins	Thu, 8 Dec 2016 16:52:09 -0800	134 lines
[git/cctbx] master: Add help string (5c2bbde)	CCTBX Commit via DLS Jenkins	Thu, 8 Dec 2016 16:12:51 -0800	83 lines
[git/cctbx] master: Modifications for the interface with new module (7af1b32)	CCTBX Commit via DLS Jenkins	Wed, 7 Dec 2016 18:57:49 -0800	70 lines
[git/cctbx] master: Merge branch 'master' of https://github.com/cctbx/cctbx_project (3d4ac61)	CCTBX Commit via DLS Jenkins	Wed, 7 Dec 2016 18:03:23 -0800	137 lines
[git/cctbx] master: Add indexing ambiguity module. (9bd218a)	CCTBX Commit via DLS Jenkins	Wed, 7 Dec 2016 18:02:20 -0800	1330 lines
[git/cctbx] master: returning to original order (4fa192b)	CCTBX Commit via DLS Jenkins	Wed, 7 Dec 2016 14:41:27 -0800	78 lines
[git/cctbx] master: auto_sharpen: added modifications for phenix.auto_sharpen GUI (bd754ee)	CCTBX Commit via DLS Jenkins	Wed, 7 Dec 2016 14:26:12 -0800	375 lines
[git/cctbx] master: change sampling ranges (73ebe9d)	CCTBX Commit via DLS Jenkins	Wed, 7 Dec 2016 11:42:02 -0800	97 lines
[git/cctbx] master: clean clutter (bbacd4d)	CCTBX Commit via DLS Jenkins	Wed, 7 Dec 2016 10:31:29 -0800	48 lines
[git/cctbx] master: detector_factory.imgCIF_H(): simplifiy by using CBF built-in get_detector_axis_fast/slow() functions (3dda6af)	CCTBX Commit via DLS Jenkins	Wed, 7 Dec 2016 17:13:45 +0000	116 lines
[git/cctbx] master: reduce code duplication (847bbeb)	CCTBX Commit via DLS Jenkins	Wed, 7 Dec 2016 17:13:45 +0000	176 lines
[git/cctbx] master: use larger radius (03427be)	CCTBX Commit via DLS Jenkins	Wed, 7 Dec 2016 00:07:02 -0800	74 lines
[git/cctbx] master: remove print (37a9e3d)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 23:53:18 -0800	72 lines
[git/cctbx] master: Merge branch 'master' of github.com:cctbx/cctbx_project (74a3c97)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 23:51:06 -0800	110 lines
[git/cctbx] master: Add flag to avoid stops in PDB interpretation (c10d6e4)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 23:50:36 -0800	110 lines
[git/cctbx] master: Radius-optimized map CC (d1d110a)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 23:47:37 -0800	116 lines
[git/cctbx] master: Merge branch 'master' of github.com:cctbx/cctbx_project (47e6535)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 15:33:12 -0800	52 lines
[git/cctbx] master: Psana module to sort events based on psana evr codes. (9049e78)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 15:00:36 -0800	365 lines
[git/cctbx] master: Added a "fake" queue using the python multiprocessing module (348de5c)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 13:24:56 -0800	155 lines
[git/cctbx] master: 20% speedup for clashscore and probably for other validation stuff. Many similar improvements can be made to this file. (3c35631)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 11:29:29 -0800	123 lines
[git/cctbx] master: reorder of cctbx git url (eb6f05f)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 11:16:26 -0800	78 lines
[git/cctbx] master: Remove unused import (59a37e7)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 11:02:30 -0800	78 lines
[git/cctbx] master: Adding log to extract_secondary_structure functions. is_ca_only() for hierarchy and model. clean clutter (5552d2d)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 10:11:39 -0800	267 lines
[git/cctbx] master: FormatCBFFullPilatusDLS6MSN100.py: don't override default _goniometer method (411e479)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 16:37:39 +0000	122 lines
Jenkins 5a cctbx Tests build 3597 Still Unstable	Jenkins Build Server (Diamond)	Tue, 6 Dec 2016 14:39:07 +0000	272 lines
[git/cctbx] master: Rewritten loggraph parser. If you find that this does not work for you, then add a relevant test case. (63b9e85)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 14:33:52 +0000	580 lines
Jenkins 5a cctbx Tests build 3596 Still Unstable	Jenkins Build Server (Diamond)	Tue, 6 Dec 2016 14:20:58 +0000	287 lines
[git/cctbx] master: new dxtbx format class FormatCBFFullPilatusDLS6MSN100.py for DLS I04 (137c4cc)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 14:17:21 +0000	875 lines
Jenkins 5a cctbx Tests build 3595 Unstable	Jenkins Build Server (Diamond)	Tue, 6 Dec 2016 12:54:03 +0000	98 lines
Jenkins 5a cctbx Tests build 3595 Unstable	Jenkins Build Server (Diamond)	Tue, 6 Dec 2016 12:54:01 +0000	36 lines
[git/cctbx] master: According to http://www.ccp4.ac.uk/html/loggraphformat.html newlines in the loggraph table format must be treated as value separators, not row separators. Thus this test is still correct, however the implementation is broken. This test reproduces an issue with the current version of aimless, which may split output rows into multiple lines causing iotbx to crash. (f5a015c)	CCTBX Commit via DLS Jenkins	Tue, 6 Dec 2016 12:49:37 +0000	97 lines
[git/cctbx] master: another... (0bb0703)	CCTBX Commit via DLS Jenkins	Mon, 5 Dec 2016 21:23:58 -0800	1661 lines
[git/cctbx] master: removing a bad commit (f811ffe)	CCTBX Commit via DLS Jenkins	Mon, 5 Dec 2016 21:19:20 -0800	56 lines
[git/cctbx] master: clean clutter (548a759)	CCTBX Commit via DLS Jenkins	Mon, 5 Dec 2016 17:08:49 -0800	98 lines
[git/cctbx] master: more testing (1607c23)	CCTBX Commit via DLS Jenkins	Mon, 5 Dec 2016 17:06:48 -0800	1768 lines
[git/cctbx] master: testing module for dynamic metal coordination (9427dbf)	CCTBX Commit via DLS Jenkins	Mon, 5 Dec 2016 15:33:43 -0800	413 lines
[git/cctbx] master: clean clutter for restart of repo polling (42493f0)	CCTBX Commit via DLS Jenkins	Mon, 5 Dec 2016 11:07:58 -0800	74 lines
[git/cctbx] master: A command-line tool for flipping quasi-symmetric residues (338d44d)	CCTBX Commit via DLS Jenkins	Mon, 5 Dec 2016 10:14:57 -0800	150 lines
[git/cctbx] master: Output two maps: (F_obs, Phase_obs) - (F_calc, Phase_calc) and (F_obs-F_calc, Phase_obs) (10b58f6)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 19:51:35 -0800	204 lines
[git/cctbx] master: and rename (ec1b35b)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 19:26:07 -0800	96 lines
[git/cctbx] master: mov eback (3fa00ad)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 19:22:39 -0800	181 lines
[git/cctbx] master: Another fix (2e3a1ec)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 18:54:01 -0800	100 lines
[git/cctbx] master: fix bug (ba4012a)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 18:50:26 -0800	84 lines
[git/cctbx] master: Real-space difference map (phenix.real_space_diff_map) and supporting tools. (14725f4)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 18:33:06 -0800	770 lines
[git/cctbx] master: Add info about tests that brake this assertion. (9a5b737)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 16:55:21 -0800	85 lines
[git/cctbx] master: remove del (e5f87e7)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 16:33:20 -0800	72 lines
[git/cctbx] master: Merge branch 'master' of https://github.com/cctbx/cctbx_project (2bef0df)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 16:29:38 -0800	232 lines
[git/cctbx] master: filter bad CS (10ee07f)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 16:28:52 -0800	111 lines
[git/cctbx] master: Method to split box into subboxes by size. Compute F1-scale*F2 with optimal scale and F1 and F2 being complex. (54ec0cc)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 16:21:39 -0800	478 lines
[git/cctbx] master: revert presumably unintended reversion of iotbx/merging_statistics.py in a857ee7e56 (2426c80)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 20:32:01 +0000	179 lines
[git/cctbx] master: merging_statistcs: reapply change from 80c2df76f0a60d62b7085ac509ca9faefb157115 commit; fix columns in quality_table (f3a6447)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 11:32:29 -0800	77 lines
[git/cctbx] master: Fixing a bug in iotbx/pdb/fetch.py that retrieved a PDB formatted coordinate file from the local mirror when asking for a mmcif. Now behaves properly, i.e.retrieves an mmcif file when asked to do so. (14fe5f8)	CCTBX Commit via DLS Jenkins	Fri, 2 Dec 2016 08:54:58 -0500	132 lines
[git/cctbx] master: Prepare for end to end test. Change how argument is read in. (da12c27)	CCTBX Commit via DLS Jenkins	Thu, 1 Dec 2016 19:55:14 -0800	514 lines
[git/cctbx] master: Disable unstable checkpoint. (5b3a7b6)	CCTBX Commit via DLS Jenkins	Thu, 1 Dec 2016 19:51:56 -0800	84 lines
[git/cctbx] master: forgot print (a0fb60a)	CCTBX Commit via DLS Jenkins	Thu, 1 Dec 2016 19:23:16 -0800	71 lines
[git/cctbx] master: Merge branch 'cif_biomt' (d972d84)	CCTBX Commit via DLS Jenkins	Thu, 1 Dec 2016 18:40:09 -0800	56 lines
[git/cctbx] master: workaround plug for reading BIOMT from mmCIF. PDB extension for phenix.pdb.biomt_reconstruction (6a2e986)	CCTBX Commit via DLS Jenkins	Thu, 1 Dec 2016 18:09:10 -0800	308 lines
[git/cctbx] master: Complete refactor of dxtbx.image_average to support multiprocessing over HDF5 files (63f6c55)	CCTBX Commit via DLS Jenkins	Thu, 1 Dec 2016 16:48:00 -0800	928 lines
[git/cctbx] master: Command line version of plot_uc_cloud that directly works on dials experiments.json files, no db required. (78b20cd)	CCTBX Commit via DLS Jenkins	Thu, 1 Dec 2016 12:00:06 -0800	210 lines
[git/cctbx] master: Workaround bug-prone BIOMT processing (561546f)	CCTBX Commit via DLS Jenkins	Thu, 1 Dec 2016 10:05:28 -0800	103 lines
Jenkins 5a cctbx Tests build 3578 Fixed	Jenkins Build Server (Diamond)	Thu, 1 Dec 2016 04:19:13 +0000	36 lines
[git/cctbx] master: prime rollback resolving some conflicts Merge branch 'master' of https://github.com/cctbx/cctbx_project (7f3e059)	CCTBX Commit via DLS Jenkins	Wed, 30 Nov 2016 16:52:46 -0800	66 lines
[git/cctbx] master: prime rollback Prime got a rollback due to collateral changes to this revision: https://github.com/cctbx/cctbx_project/commit/871e0f3197240a64fd25a7889c1d91505238cec4 The main CLI (prime.run input.phil) should work fine but new functionalities such as indexing ambiguity autosolve will not be available until refactoring work is done. (5269f8e)	CCTBX Commit via DLS Jenkins	Wed, 30 Nov 2016 16:45:05 -0800	180 lines
[git/cctbx] master: updaet chain_comparison to run set of files (2497c4b)	CCTBX Commit via DLS Jenkins	Wed, 30 Nov 2016 17:27:13 -0700	449 lines
[git/cctbx] master: count tncs copies from 1 (57a13ac)	CCTBX Commit via DLS Jenkins	Tue, 29 Nov 2016 11:44:25 +0000	80 lines
[git/cctbx] master: Merge branch 'master' of github.com:cctbx/cctbx_project (24c2a2c)	CCTBX Commit via DLS Jenkins	Mon, 28 Nov 2016 12:42:42 +0000	54 lines
[git/cctbx] master: note largest TNCS number (7fe7f51)	CCTBX Commit via DLS Jenkins	Fri, 25 Nov 2016 17:37:45 +0000	163 lines

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