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Subject	From	Date	Size
[git/cctbx_project] master: add analyze_aniso in refine_sharpening (a46faaafc2)	CCTBX commit	Sat, 31 Oct 2020 10:10:13 -0600	1027 lines
[git/cctbx_project] master: Fix more ResourceWarnings (f59dc0baee)	CCTBX commit	Sat, 31 Oct 2020 12:49:53 +0000	148 lines
[git/cctbx_project] master: Remove extra iter (3725d5b853)	CCTBX commit	Fri, 30 Oct 2020 22:25:04 -0700	94 lines
[git/cctbx_project] master: Fix some warnings from PYTHONDEVMODE (5ae04d2955)	CCTBX commit	Fri, 30 Oct 2020 17:03:00 -0700	321 lines
[git/cctbx_project] master: CI: turn on PYTHONDEVMODE (d3a42377a1)	CCTBX commit	Fri, 30 Oct 2020 17:03:00 -0700	118 lines
[git/cctbx_project] master: correct struct_conn for H-bonds (4bdff1c202)	CCTBX commit	Fri, 30 Oct 2020 16:37:52 -0700	93 lines
[git/cctbx_project] master: save omega ideals and esds to xmgrace format (28f5e80c17)	CCTBX commit	Fri, 30 Oct 2020 15:47:58 -0700	131 lines
[git/cctbx_project] master: Fix typo where shift_cart as list and tuple were compared; assume model unit_cell_crystal_symmetry is unknown if identical to crystal_symmetry (c419348f72)	CCTBX commit	Fri, 30 Oct 2020 12:44:23 -0700	175 lines
[git/cctbx_project] master: For PAL NeXus, use a VDS for wavelength instead of a copy (36aaa9e178)	CCTBX commit	Fri, 30 Oct 2020 10:40:22 -0700	138 lines
[git/cctbx_project] master: fix typos (c9b5fc979a)	CCTBX commit	Fri, 30 Oct 2020 08:20:17 -0600	120 lines
[git/cctbx_project] master: Fix ResourceWarnings (edffe320b7)	CCTBX commit	Fri, 30 Oct 2020 09:55:37 +0000	677 lines
[git/cctbx_project] master: adjusted mon_lib_query (8429c438ff)	CCTBX commit	Thu, 29 Oct 2020 17:52:36 -0700	152 lines
[git/cctbx_project] master: Update defaults (6c48d6c240)	CCTBX commit	Thu, 29 Oct 2020 17:50:23 -0600	116 lines
[git/cctbx_project] master: update expected results to expect .ccp4 not .mrc (bfa620d0f4)	CCTBX commit	Thu, 29 Oct 2020 15:17:16 -0700	95 lines
[git/cctbx_project] master: Fix local_resolution with ncs (c8349e1bbf)	CCTBX commit	Thu, 29 Oct 2020 14:58:04 -0600	224 lines
[git/cctbx_project] master: change default map name to ccp4 from mrc to match general cctbx output file names; allow setting more defaults in map_model_manager (38b386a31a)	CCTBX commit	Thu, 29 Oct 2020 14:29:47 -0600	663 lines
[git/dxtbx] master: Jungfrau XTC: read distance from XTC (#246) (db550ef)	DXTBX commit	Thu, 29 Oct 2020 11:00:44 -0700	225 lines
[git/cctbx_project] master: missing ssh flag for phasertng (7760bf7764)	CCTBX commit	Thu, 29 Oct 2020 17:25:40 +0000	119 lines
[git/cctbx_project] master: remove default https access to phasertng (3b3eef14ac)	CCTBX commit	Thu, 29 Oct 2020 16:23:02 +0000	99 lines
[git/dxtbx] master: Fix bad reST markup in Changelog (99ef9e2)	DXTBX commit	Thu, 29 Oct 2020 13:04:28 +0000	205 lines
[git/dxtbx] master: Turn ticket references in changelog into links. (9ace09e)	DXTBX commit	Thu, 29 Oct 2020 12:48:24 +0000	755 lines
[git/cctbx_project] master: fix commit ffd70478 (#549) (476428363d)	CCTBX commit	Wed, 28 Oct 2020 15:25:29 -0700	99 lines
[git/cctbx_project] master: bootstrap: pick "distribution" branch for phaser_voyager (269d78cc3f)	CCTBX commit	Tue, 27 Oct 2020 21:05:35 -0700	99 lines
[git/cctbx_project] master: Reduce rewrite: add test (b8cf699cc8)	CCTBX commit	Tue, 27 Oct 2020 14:41:22 -0700	847 lines
[git/cctbx_project] master: Reduce rewrite: refactor tests. (45b17e940f)	CCTBX commit	Tue, 27 Oct 2020 13:32:17 -0700	950 lines
[git/cctbx_project] master: fix typo (7db9ff4a0d)	CCTBX commit	Tue, 27 Oct 2020 12:24:51 -0700	90 lines
[git/cctbx_project] master: clean clutter (7d7b713951)	CCTBX commit	Tue, 27 Oct 2020 13:10:34 -0600	64 lines
[git/cctbx_project] master: Set overall-local-overall as default, update expected output, set spectral_sharpening as default (8fea258480)	CCTBX commit	Tue, 27 Oct 2020 11:29:23 -0700	1039 lines
[git/cctbx_project] master: Remove platform.dist() call in installer (2dab3d3204)	CCTBX commit	Tue, 27 Oct 2020 17:43:51 +0000	129 lines
[git/cctbx_project] master: CI: skip conda update step on Windows (299cec6e8e)	CCTBX commit	Tue, 27 Oct 2020 08:59:46 -0700	99 lines
[git/cctbx_project] master: Ensure check_suite event is triggered for 'master' (749da42e9f)	CCTBX commit	Tue, 27 Oct 2020 12:15:04 +0000	165 lines
[git/dxtbx] master: DIALS 3.2.0 Changelog (4478600)	DXTBX commit	Tue, 27 Oct 2020 11:53:36 +0000	396 lines
[git/dxtbx] master: Set unpolarised beam for very short wavelength (#243) (1ced7fb)	DXTBX commit	Tue, 27 Oct 2020 11:41:43 +0000	215 lines
[git/cctbx_project] master: Check check outcomes of the triggering commit, (5c1090ca73)	CCTBX commit	Tue, 27 Oct 2020 10:49:45 +0000	164 lines
[git/cctbx_project] master: CCTBX website: make sure test result is passed. (33a80d08b6)	CCTBX commit	Mon, 26 Oct 2020 22:44:54 -0700	285 lines
[git/cctbx_project] master: libtbx: add build_dir argument to get_local_env function to specify where local environment is stored (cf342307d0)	CCTBX commit	Mon, 26 Oct 2020 22:13:49 -0700	136 lines
[git/cctbx_project] master: Reduce rewrite: ignore H on missing heavy atoms. (f3233dfabd)	CCTBX commit	Mon, 26 Oct 2020 16:09:52 -0700	202 lines
[git/cctbx_project] master: Reduce rewrite: return if no H found. (b446b87096)	CCTBX commit	Mon, 26 Oct 2020 13:43:26 -0700	93 lines
[git/cctbx_project] master: Reduce rewrite: bugfix for certain cases of double conformations. (7c7e0e1627)	CCTBX commit	Mon, 26 Oct 2020 10:24:04 -0700	220 lines
[git/dxtbx] master: Hardlink fix for NeXus files (#240) (442d8a0)	DXTBX commit	Mon, 26 Oct 2020 15:27:03 +0000	113 lines
[git/dxtbx] master: Allow gain set in the SMV header to override guesswork (#242) (42ef626)	DXTBX commit	Mon, 26 Oct 2020 13:03:02 +0000	124 lines
[git/dxtbx] master: Strip timezone from nxs in dlsnxs2cbf (#235) (9a3a067)	DXTBX commit	Mon, 26 Oct 2020 12:29:43 +0000	120 lines
[git/cctbx_project] master: Support flex.size_t as input to iotbx.cif.model.loop (#547) (32f1222476)	CCTBX commit	Mon, 26 Oct 2020 08:35:56 +0000	132 lines
[git/cctbx_project] master: Reduce rewrite: refactor. (8869cb1d75)	CCTBX commit	Sun, 25 Oct 2020 18:58:33 -0700	1550 lines
[git/cctbx_project] master: iotbx: modify id list for skipped cc (e1a0639ea9)	CCTBX commit	Sun, 25 Oct 2020 14:25:54 -0700	102 lines
[git/cctbx_project] master: Reduce rewrite: stub for informative output. (0afb25ec8d)	CCTBX commit	Sun, 25 Oct 2020 13:05:11 -0700	390 lines
[git/cctbx_project] master: skip high_pass cc test (2659cd6d1d)	CCTBX commit	Sun, 25 Oct 2020 14:00:58 -0600	115 lines
[git/cctbx_project] master: Remove unused imports (d6824c1d7d)	CCTBX commit	Sun, 25 Oct 2020 08:46:37 -0700	105 lines
[git/cctbx_project] master: clean clutter (ab21e8ceff)	CCTBX commit	Sun, 25 Oct 2020 08:35:19 -0700	88 lines
[git/cctbx_project] master: Update expected output and update weighting for anisotropic scale ID (60fe8bd322)	CCTBX commit	Sun, 25 Oct 2020 07:30:22 -0700	196 lines
[git/cctbx_project] master: Increase tolerance in tests involving randomization (82b4db46e6)	CCTBX commit	Sun, 25 Oct 2020 06:04:46 -0600	94 lines
[git/cctbx_project] master: Riding H: make sure that H with dihedral is processed first for propeller group. (b6fb8ce2c4)	CCTBX commit	Sat, 24 Oct 2020 21:03:40 -0700	613 lines
[git/cctbx_project] master: Minor keyword changes (17c261b4c3)	CCTBX commit	Sat, 24 Oct 2020 20:09:58 -0600	740 lines
[git/cctbx_project] master: Restore caption (8899b81694)	CCTBX commit	Sat, 24 Oct 2020 07:32:06 -0700	87 lines
[git/cctbx_project] master: Riding H: restore keyword (7931ef89bc)	CCTBX commit	Fri, 23 Oct 2020 20:37:11 -0700	109 lines
[git/cctbx_project] master: catch missing entry (5de1848c27)	CCTBX commit	Fri, 23 Oct 2020 17:10:20 -0700	96 lines
[git/cctbx_project] master: Add approx_amplitude_vs_resolution.py (01c644f315)	CCTBX commit	Fri, 23 Oct 2020 16:17:40 -0700	2326 lines
[git/cctbx_project] master: Update GRM with new crystal symmetry rather than unset it. This may need more testing (579102e508)	CCTBX commit	Fri, 23 Oct 2020 14:55:37 -0700	147 lines
[git/cctbx_project] master: clean clutter (3e274be2e9)	CCTBX commit	Fri, 23 Oct 2020 11:28:15 -0700	64 lines
[git/cctbx_project] master: Restore try_single_processor_on_failure (03757ece83)	CCTBX commit	Fri, 23 Oct 2020 11:27:19 -0700	226 lines
[git/cctbx_project] master: Update expected output (6f35a088a9)	CCTBX commit	Fri, 23 Oct 2020 11:10:02 -0700	423 lines
[git/cctbx_project] master: merge in changes in map_model_manager (6cd2444955)	CCTBX commit	Fri, 23 Oct 2020 07:20:39 -0700	73 lines
[git/cctbx_project] master: restore originals (a3a366d4dc)	CCTBX commit	Fri, 23 Oct 2020 07:14:29 -0700	75 lines
[git/cctbx_project] master: keep restraints when removing waters; fix map_to_model errors; allow redo in easy_mp run_parallel if multiprocessing fails; update local anisotropic sharpening (b88f9883ef)	CCTBX commit	Fri, 23 Oct 2020 07:13:39 -0700	98 lines
[git/cctbx_project] master: Clean clutter (61063194c9)	CCTBX commit	Thu, 22 Oct 2020 22:07:37 -0700	216 lines
[git/cctbx_project] master: cctbx doc: make tests parallel (26ea12301a)	CCTBX commit	Thu, 22 Oct 2020 21:16:26 -0700	437 lines
[git/cctbx_project] master: Sphinx doc: Add map_manager and map_model_manager (bd58c0a43a)	CCTBX commit	Thu, 22 Oct 2020 16:01:10 -0700	136 lines
[git/cctbx_project] master: Better output filename (4ee7ac6476)	CCTBX commit	Thu, 22 Oct 2020 14:04:46 -0700	115 lines
[git/cctbx_project] master: Reduce rewrite: Can place H on ligands that are in the monomer library. (bbf42d0fe4)	CCTBX commit	Thu, 22 Oct 2020 12:47:33 -0700	192 lines
[git/cctbx_project] master: Allow external scattering dictionary (10326d28d1)	CCTBX commit	Thu, 22 Oct 2020 11:34:44 -0700	130 lines
[git/cctbx_project] master: bootstrap: default to ssh for phaser_voyager (418b2b52bc)	CCTBX commit	Thu, 22 Oct 2020 10:18:33 -0700	95 lines
[git/cctbx_project] master: Change required to fix e.g. dials.image_viewer on Linux (#545) (88a8c7f497)	CCTBX commit	Thu, 22 Oct 2020 09:37:26 +0100	95 lines
[git/cctbx_project] master: use chainid if it is longer than segid. (2368649b96)	CCTBX commit	Wed, 21 Oct 2020 15:15:38 -0700	91 lines
[git/cctbx_project] master: switch to using mmtbx.model (b73b1bbca5)	CCTBX commit	Wed, 21 Oct 2020 10:21:22 -0700	224 lines
[git/cctbx_project] master: bootstrap: update phenix_tng to phenix_voyager (17420bec49)	CCTBX commit	Wed, 21 Oct 2020 08:07:37 -0700	148 lines
[git/dxtbx] master: Revert "If we only accept 1 image data sets, say so" (6e91573)	DXTBX commit	Wed, 21 Oct 2020 08:20:08 +0100	113 lines
[git/dxtbx] master: If we only accept 1 image data sets, say so (fe5c347)	DXTBX commit	Wed, 21 Oct 2020 07:51:10 +0100	108 lines
[git/cctbx_project] master: Add as_map_manager (55ac7d20b0)	CCTBX commit	Tue, 20 Oct 2020 16:06:09 -0700	237 lines
[git/cctbx_project] master: bootstrap: add phaser_voyager (759bbc3b8c)	CCTBX commit	Tue, 20 Oct 2020 15:52:54 -0700	174 lines
[git/cctbx_project] master: CI: clear up more space for XFEL CI (73600026ba)	CCTBX commit	Tue, 20 Oct 2020 09:58:16 -0700	117 lines
[git/cctbx_project] master: No longer automatically update dependencies, #535 (b3afdd3986)	CCTBX commit	Tue, 20 Oct 2020 13:20:11 +0100	559 lines
[git/cctbx_project] master: No longer automatically update dependencies (2ab8ffbb44)	CCTBX commit	Tue, 20 Oct 2020 13:18:35 +0100	534 lines
[git/cctbx_project] master: fetch_pdb (CL): try to get model in mmCIF if not available as PDB, if --all, keep trying to get the rest files, don't Sorry if PDB is not available. (99c11b191f)	CCTBX commit	Mon, 19 Oct 2020 17:43:59 -0700	147 lines
[git/cctbx_project] master: Outputting Wilson B to PDB. More reliable output for mmCIF. (a6af8222c0)	CCTBX commit	Mon, 19 Oct 2020 16:33:44 -0700	191 lines
[git/cctbx_project] master: more helpful exit if linking fails on RU (bedec52653)	CCTBX commit	Mon, 19 Oct 2020 16:33:12 -0700	131 lines
[git/cctbx_project] master: mtz.object.miller_arrays_as_dict(): add anomlous=None kwd (b043ec0c32)	CCTBX commit	Mon, 19 Oct 2020 08:26:28 +0100	149 lines
[git/cctbx_project] master: Add possibility to read a custom scattering dictionary (04ecdd6c10)	CCTBX commit	Sun, 18 Oct 2020 19:37:58 -0700	222 lines
[git/cctbx_project] master: Reduce rewrite: clean up tests. Add check for coordinates. (440c1ebf4d)	CCTBX commit	Sat, 17 Oct 2020 22:31:08 -0700	589 lines
[git/cctbx_project] master: Reduce rewrite: add tests. (62820dd8e6)	CCTBX commit	Sat, 17 Oct 2020 20:56:37 -0700	840 lines
[git/cctbx_project] master: CI: start basic Python 3.9 build (0bbcb18833)	CCTBX commit	Sat, 17 Oct 2020 17:20:08 -0700	1155 lines
[git/cctbx_project] master: reduce the timeouts as results should now be instantaneous (19fbc5f822)	CCTBX commit	Sun, 18 Oct 2020 00:06:08 +0100	152 lines
[git/cctbx_project] master: mirror branch on completion of CI runs (0032cffb36)	CCTBX commit	Sat, 17 Oct 2020 22:15:05 +0100	95 lines
[git/cctbx_project] master: Add test based on Christopher W. example. (9d185c4e73)	CCTBX commit	Sat, 17 Oct 2020 00:23:08 -0700	653 lines
[git/cctbx_project] master: CI: remove tests directory to free space in XFEL CI (3d6482f306)	CCTBX commit	Fri, 16 Oct 2020 20:34:02 -0700	92 lines
[git/cctbx_project] master: iotbx: add GUI style to map_model PHIL scope (33b13debfc)	CCTBX commit	Fri, 16 Oct 2020 16:27:32 -0700	115 lines
[git/cctbx_project] master: Add script to create NeXus masters for JF4M data from PAL (5bd97300d4)	CCTBX commit	Fri, 16 Oct 2020 15:59:14 -0700	748 lines
[git/dxtbx] master: 2d detector projection (#224) (6c70ce6)	DXTBX commit	Fri, 16 Oct 2020 10:44:44 +0100	824 lines
[git/cctbx_project] master: Reduce rewrite: Allow multi-model files. (1f31b14f0f)	CCTBX commit	Thu, 15 Oct 2020 14:23:32 -0700	345 lines
[git/cctbx_project] master: Reduce rewrite: bugfixes (78ba38e8bc)	CCTBX commit	Thu, 15 Oct 2020 13:41:20 -0700	145 lines
[git/cctbx_project] master: bugfixes (624ff2cf12)	CCTBX commit	Thu, 15 Oct 2020 09:45:09 -0700	365 lines
[git/dxtbx] master: Revert "Move CBF compression and decompression routines into dxtbx (#228)" (92d379d)	DXTBX commit	Thu, 15 Oct 2020 11:50:14 +0100	941 lines
[git/cctbx_project] master: py3: fix dict keys (703546dcc1)	CCTBX commit	Wed, 14 Oct 2020 22:30:40 -0700	124 lines
[git/cctbx_project] master: gltbx: update keyword from range to range_values (b7fa72ab21)	CCTBX commit	Wed, 14 Oct 2020 21:53:34 -0700	155 lines
[git/cctbx_project] master: reorg of readySet! files (d15f195487)	CCTBX commit	Wed, 14 Oct 2020 15:57:39 -0700	766 lines
[git/dxtbx] master: Move CBF compression and decompression routines into dxtbx (#228) (8824453)	DXTBX commit	Wed, 14 Oct 2020 17:21:19 +0100	940 lines
[git/dxtbx] master: Refactor tests to use dials_data (#230) (04b6a30)	DXTBX commit	Wed, 14 Oct 2020 15:48:36 +0100	257 lines
[git/dxtbx] master: add news for #231 (8805a53)	DXTBX commit	Wed, 14 Oct 2020 13:35:50 +0100	77 lines
[git/dxtbx] master: Add a pytest launcher to dxtbx (#231) (12d979b)	DXTBX commit	Wed, 14 Oct 2020 13:34:34 +0100	98 lines
[git/cctbx_project] master: remove pytest again (ca087bb127)	CCTBX commit	Wed, 14 Oct 2020 11:43:35 +0100	97 lines
[git/cctbx_project] master: Add r_anom to merging_statistics output (#541) (0e0e835d55)	CCTBX commit	Wed, 14 Oct 2020 09:25:14 +0100	372 lines
[git/cctbx_project] master: Bug fixes (34ace33f30)	CCTBX commit	Tue, 13 Oct 2020 22:24:09 -0700	427 lines
[git/dxtbx] master: Pick up template for imageNNNNN e.g. what we use for 0mq dump (#234) (b160be2)	DXTBX commit	Wed, 14 Oct 2020 06:04:39 +0100	212 lines
[git/cctbx_project] master: CI: add Python 3.9 to Checks pipeine (aaed17c66c)	CCTBX commit	Tue, 13 Oct 2020 15:40:17 -0700	112 lines
[git/cctbx_project] master: Reduce rewrite: rearrange and add comments. (93da5f9c7a)	CCTBX commit	Tue, 13 Oct 2020 14:47:51 -0700	572 lines
[git/cctbx_project] master: Clean clutter (da537c2305)	CCTBX commit	Tue, 13 Oct 2020 12:42:33 -0700	112 lines
[git/cctbx_project] master: Move hydrogenate from phenix to cctbx. Add parameters to CL. (03e6fc82f9)	CCTBX commit	Tue, 13 Oct 2020 12:27:42 -0700	477 lines
[git/dxtbx] master: DIALS 3.1.4 Changelog (55bc100)	DXTBX commit	Tue, 13 Oct 2020 11:59:13 +0100	97 lines
[git/cctbx_project] master: Put some imports back. (4134bb911f)	CCTBX commit	Mon, 12 Oct 2020 21:34:27 -0700	106 lines
[git/cctbx_project] master: Move add function from __init__ to new file (25cbba2db0)	CCTBX commit	Mon, 12 Oct 2020 20:44:07 -0700	992 lines
[git/cctbx_project] master: Fixing broken TLS (8c34c72ff6)	CCTBX commit	Mon, 12 Oct 2020 17:55:34 -0700	125 lines
[git/cctbx_project] master: py3: updates for collections.abc (bf597619a8)	CCTBX commit	Sat, 10 Oct 2020 13:20:55 -0700	168 lines
[git/cctbx_project] master: Remove register compiler hints (3ab869eca5)	CCTBX commit	Sat, 10 Oct 2020 13:20:55 -0700	458 lines
[git/cctbx_project] master: clean clutter (4ad3bd9125)	CCTBX commit	Sat, 10 Oct 2020 09:42:57 -0700	64 lines
[git/cctbx_project] master: Fix cases where range was used as a variable; set morphing log (6ffb333196)	CCTBX commit	Sat, 10 Oct 2020 09:22:34 -0700	540 lines
[git/cctbx_project] master: iotbx: add chem_data check for tst_map_manager.py and tst_box_around_molecule.py (53004417db)	CCTBX commit	Fri, 9 Oct 2020 21:44:51 -0700	131 lines
[git/cctbx_project] master: Turn off test (bcdd046d0f)	CCTBX commit	Fri, 9 Oct 2020 15:56:06 -0700	89 lines
[git/cctbx_project] master: label_asym_id corner case fixed with test (be9c96dd79)	CCTBX commit	Fri, 9 Oct 2020 15:55:34 -0700	460 lines
[git/cctbx_project] master: clean clutter (9aca58f5a9)	CCTBX commit	Fri, 9 Oct 2020 15:39:00 -0700	92 lines
[git/cctbx_project] master: catch case where model has not been processed but crystal symmetry change is requested (20ac467e77)	CCTBX commit	Fri, 9 Oct 2020 15:26:20 -0700	627 lines
[git/cctbx_project] master: mmtbx: update filename in test (04139fbe8f)	CCTBX commit	Fri, 9 Oct 2020 14:22:35 -0700	94 lines
[git/cctbx_project] master: Use cs upfront; adjust expected number of links to the correct number. (32eca5f82d)	CCTBX commit	Fri, 9 Oct 2020 14:17:47 -0700	128 lines
[git/cctbx_project] master: test fixed (8be5c2a287)	CCTBX commit	Fri, 9 Oct 2020 13:50:44 -0700	119 lines
[git/cctbx_project] master: libtbx: reorder constructor in ProgramTemplate and add link for DataManager (dd5c01472a)	CCTBX commit	Fri, 9 Oct 2020 12:14:34 -0700	145 lines
[git/cctbx_project] master: Support cif format for xfel scaling model (#538) (257d179ccf)	CCTBX commit	Fri, 9 Oct 2020 11:59:10 -0700	181 lines
[git/cctbx_project] master: Fix call consistencies (6e1931dafc)	CCTBX commit	Fri, 9 Oct 2020 09:33:05 -0700	227 lines
[git/cctbx_project] master: This fixes linking test (non-orthogonal box can screw distances!) (58a36526ca)	CCTBX commit	Thu, 8 Oct 2020 16:12:57 -0700	119 lines
[git/cctbx_project] master: This fixes 'metal coordination test'. Also, run t96 before enabling re-creation of restraints as part of get_restraints_manager call. Disabled again because it breaks tests. (3d444d5a3e)	CCTBX commit	Thu, 8 Oct 2020 15:46:29 -0700	135 lines
[git/cctbx_project] master: Adding anisotropic local sharpening (ff5be78e1b)	CCTBX commit	Thu, 8 Oct 2020 16:19:43 -0600	89 lines
[git/cctbx_project] master: minor formatting (0ee0e184e6)	CCTBX commit	Thu, 8 Oct 2020 14:55:17 -0700	119 lines
[git/cctbx_project] master: returned automatic GRM creation (376367aba2)	CCTBX commit	Thu, 8 Oct 2020 13:40:40 -0700	92 lines
[git/cctbx_project] master: Further development (bae199a348)	CCTBX commit	Thu, 8 Oct 2020 12:49:14 -0700	595 lines
[git/cctbx_project] master: Refactor to use common base class and mixin classes. (9d05bc8f81)	CCTBX commit	Thu, 8 Oct 2020 12:49:14 -0700	390 lines
[git/cctbx_project] master: Add ManualGeometryUpdater (898883853f)	CCTBX commit	Thu, 8 Oct 2020 12:49:14 -0700	135 lines
[git/cctbx_project] master: First pass at implementing an API for use by LCLS (53ec505a7d)	CCTBX commit	Thu, 8 Oct 2020 12:49:14 -0700	407 lines
[git/cctbx_project] master: Jungfrau4m support plus bugfixes (6ef1304cec)	CCTBX commit	Thu, 8 Oct 2020 12:49:14 -0700	277 lines
[git/cctbx_project] master: Add Rayonix support (984a91f096)	CCTBX commit	Thu, 8 Oct 2020 12:49:14 -0700	224 lines
[git/cctbx_project] master: iotbx: Prevent custom_init from being called twice (78f5f6cf56)	CCTBX commit	Thu, 8 Oct 2020 10:50:38 -0700	94 lines
[git/dxtbx] master: Refactor FormatXTC classes (7357e95)	DXTBX commit	Thu, 8 Oct 2020 10:22:59 -0700	1302 lines
[git/cctbx_project] master: Fix bug in data_manager.get_map_model_manager() Added test (eeb1a7159b)	CCTBX commit	Wed, 7 Oct 2020 18:21:47 -0700	201 lines
[git/cctbx_project] master: Set all_chain_proxies to None for all in mmtbx.model (before removing it completely) (1bce5a0bd2)	CCTBX commit	Wed, 7 Oct 2020 17:15:37 -0700	208 lines
[git/cctbx_project] master: This was used for NQH flips. This is not comprehensive. Use GRM instead. Added to TODO. Also, this rids one more instance of using all_chain_proxies! (c59ac161cb)	CCTBX commit	Wed, 7 Oct 2020 16:36:57 -0700	101 lines
[git/cctbx_project] master: libtbx: updates for installed environment (495c8b3430)	CCTBX commit	Wed, 7 Oct 2020 16:33:17 -0700	185 lines
[git/cctbx_project] master: One more round of reducing the use of all_chain_proxies in model (aadfe4a574)	CCTBX commit	Wed, 7 Oct 2020 15:59:48 -0700	295 lines
[git/cctbx_project] master: Liberate anomalous_groups stuff from dependency on all_chain_proxies (246135cda3)	CCTBX commit	Wed, 7 Oct 2020 15:22:05 -0700	533 lines
[git/cctbx_project] master: Towards removing all_chain_proxies in mmtbx.model: 1) separate selection and all_chain_proxies in pdb_interpretation; 2) make smart atom selection in mmtbx.model independent of all_chain_proxies (891a7f1e0b)	CCTBX commit	Wed, 7 Oct 2020 13:42:07 -0700	961 lines
[git/cctbx_project] master: Remove self._processed_pdb_files_srv (8559654ce5)	CCTBX commit	Wed, 7 Oct 2020 11:08:11 -0700	393 lines
[git/cctbx_project] master: Continue cleanup... (1b87d0c87b)	CCTBX commit	Wed, 7 Oct 2020 10:38:05 -0700	486 lines
[git/cctbx_project] master: Fixing the test (16f3e2573a)	CCTBX commit	Wed, 7 Oct 2020 10:21:17 -0700	93 lines
[git/cctbx_project] master: avoid crash if _info is None (6590ee31e3)	CCTBX commit	Wed, 7 Oct 2020 16:48:13 +0100	92 lines
[git/dxtbx] master: Set of possible errors includes AttributeError (f227287)	DXTBX commit	Wed, 7 Oct 2020 13:55:32 +0100	96 lines
[git/cctbx_project] master: de-clutter (e9be98075a)	CCTBX commit	Wed, 7 Oct 2020 12:56:50 +0100	64 lines
[git/cctbx_project] master: Emit a string for debugging of the labels, type of data and sigmas arrays present within this miller_array (56dd50c4af)	CCTBX commit	Wed, 7 Oct 2020 12:13:14 +0100	119 lines
[git/cctbx_project] master: import moves (56178838fd)	CCTBX commit	Tue, 6 Oct 2020 14:43:14 -0700	169 lines
[git/cctbx_project] master: an ugly work-around for limited support of BIOMT records (84095798d7)	CCTBX commit	Tue, 6 Oct 2020 14:39:30 -0700	152 lines
[git/cctbx_project] master: iotbx: store parsing output from CCTBXParser (5e37228134)	CCTBX commit	Tue, 6 Oct 2020 14:14:38 -0700	104 lines
[git/cctbx_project] master: enable BIOMT processing; this breaks a few t96 (3422941b10)	CCTBX commit	Tue, 6 Oct 2020 13:22:14 -0700	100 lines
[git/cctbx_project] master: More misc fixes to address failing t96 (9c3babf07d)	CCTBX commit	Tue, 6 Oct 2020 13:03:24 -0700	159 lines
[git/dxtbx] master: Unify script handling in command_line/ (#223) (a714c01)	DXTBX commit	Tue, 6 Oct 2020 20:04:22 +0100	2535 lines
[git/cctbx_project] master: don't use bare except (52234a1ebc)	CCTBX commit	Tue, 6 Oct 2020 11:54:33 -0700	101 lines
[git/cctbx_project] master: imports update (93bef15a86)	CCTBX commit	Tue, 6 Oct 2020 11:27:42 -0700	103 lines
[git/cctbx_project] master: moved some utils to cctbx (230e971b87)	CCTBX commit	Tue, 6 Oct 2020 11:19:03 -0700	349 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (9f92eba743)	CCTBX commit	Tue, 6 Oct 2020 10:53:23 -0700	93 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (c933dd530f)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	194 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (b4274932e9)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	193 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (6d62937959)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	136 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (949dbcbc80)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	97 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (8810a388a6)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	93 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (ff3924093c)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	96 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (cbb66e9e36)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	94 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (d4c1a4d92f)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	93 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (d31e9230a5)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	115 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (9539879ba5)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	91 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (d1788bf856)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	93 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (d3207e098d)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	94 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (7624a7a6ec)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	93 lines
[git/cctbx_project] master: _process_input_model -> process_input_model (098770b2d5)	CCTBX commit	Tue, 6 Oct 2020 10:53:22 -0700	96 lines
[git/cctbx_project] master: try to make build bot happier (be18cc94ae)	CCTBX commit	Tue, 6 Oct 2020 09:47:17 -0700	102 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (79a1f25bee)	CCTBX commit	Tue, 6 Oct 2020 09:33:48 -0700	93 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (8a5baaf6e6)	CCTBX commit	Tue, 6 Oct 2020 09:33:48 -0700	90 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (48b7441b60)	CCTBX commit	Tue, 6 Oct 2020 09:33:48 -0700	100 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (c39884f8dd)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	93 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (7f8bcbc8f6)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	136 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (2b26f5df2a)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	114 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (1c412fe845)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	93 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (fd34829aa8)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	95 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (da16b5aa45)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	97 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (b4d51d57ea)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	671 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (9d661101be)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	94 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (3f91bd666f)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	150 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (ef5096739c)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	119 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (16c307838a)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	247 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (ce5df5289c)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	357 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (5a84a22355)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	91 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (f5d3bf36f0)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	89 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (4bd8440021)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	93 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (203f991ac0)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	131 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (98edc2624f)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	97 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (af31eded94)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	148 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (d25544b5cd)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	102 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (64bcac08f4)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	148 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (bd48fecf05)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	130 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (b67b64e477)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	96 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (6327d79b4c)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	94 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (3eb17d6e9d)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	125 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (d4a13bc5c0)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	123 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (4a07c31ad0)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	115 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (f468926c66)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	136 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (b057196032)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	88 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (6a8e6205ee)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	94 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (8b565c7604)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	102 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (56f8f5d9c6)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	95 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (6c2047cf1c)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	153 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (7b6d9564d5)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	97 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (80e1d47215)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	90 lines
[git/cctbx_project] master: Removing model_input and processed_pdb_file from model (4326fb5307)	CCTBX commit	Tue, 6 Oct 2020 09:33:47 -0700	95 lines
[git/dxtbx] master: Exercise getting image data out of the NearlyNexus format (#225) (2caec59)	DXTBX commit	Tue, 6 Oct 2020 09:53:41 +0100	113 lines
[git/cctbx_project] master: Minor output changes (a1983477f1)	CCTBX commit	Sun, 4 Oct 2020 19:11:51 -0600	284 lines
[git/cctbx_project] master: Allow anisotropic local sharpening (2142c3c4fa)	CCTBX commit	Sun, 4 Oct 2020 18:44:46 -0600	1911 lines
[git/cctbx_project] master: iotbx: check for Phenix in tst_map_model_manager_4.py and increase some tolerances (c8f0059dd4)	CCTBX commit	Sat, 3 Oct 2020 20:27:50 -0700	157 lines
[git/cctbx_project] master: update expected output (e5e3339f45)	CCTBX commit	Sat, 3 Oct 2020 18:58:07 -0700	132 lines
[git/cctbx_project] master: Optimize weighting on local map (ed08ba31b1)	CCTBX commit	Sat, 3 Oct 2020 18:34:44 -0600	752 lines
[git/cctbx_project] master: update expected output (307a46fc79)	CCTBX commit	Sat, 3 Oct 2020 16:13:44 -0700	91 lines
[git/cctbx_project] master: iotbx: update test for changed function name (eb9c7ee6ad)	CCTBX commit	Sat, 3 Oct 2020 15:13:40 -0700	91 lines
[git/cctbx_project] master: Use average outside mask for local model sharpening (b1b7a29441)	CCTBX commit	Sat, 3 Oct 2020 15:20:16 -0600	1439 lines
[git/cctbx_project] master: AtomSelectionError not used; causing problems elsewhere (fee091e5ca)	CCTBX commit	Sat, 3 Oct 2020 12:52:15 +0100	95 lines
[git/cctbx_project] master: Fix typo (ead5bdf93c)	CCTBX commit	Fri, 2 Oct 2020 20:28:46 -0600	478 lines
[git/cctbx_project] master: more cleaning in mmtbx.model (d8abcd6619)	CCTBX commit	Fri, 2 Oct 2020 16:34:48 -0700	86 lines
[git/cctbx_project] master: more cleaning in mmtbx.model (02bb815eda)	CCTBX commit	Fri, 2 Oct 2020 16:34:25 -0700	722 lines
[git/cctbx_project] master: clean clutter (054f3c2665)	CCTBX commit	Fri, 2 Oct 2020 16:31:16 -0700	168 lines
[git/cctbx_project] master: pass in model vs external vs half-map sharpening (efe47f2e04)	CCTBX commit	Fri, 2 Oct 2020 17:09:24 -0600	231 lines
[git/cctbx_project] master: setting up for local model and external map sharpening (4c073e934e)	CCTBX commit	Fri, 2 Oct 2020 17:00:57 -0600	794 lines
[git/cctbx_project] master: reorder of functions and moved from phenix (955ac60dfe)	CCTBX commit	Fri, 2 Oct 2020 15:30:23 -0700	630 lines
[git/cctbx_project] master: complete external and model sharpening (4e0b780dea)	CCTBX commit	Fri, 2 Oct 2020 16:24:21 -0600	635 lines
[git/cctbx_project] master: Add external sharpening and model sharpening and allow d_max_is_highest_defined_if_infinite=True in miller d_max_min() (9e0e545908)	CCTBX commit	Fri, 2 Oct 2020 15:46:49 -0600	1091 lines
[git/cctbx_project] master: Remove unnecessary stuff from constructor (1685822d96)	CCTBX commit	Fri, 2 Oct 2020 13:26:36 -0700	206 lines
[git/cctbx_project] master: More cleaning (f4a9d755c6)	CCTBX commit	Fri, 2 Oct 2020 13:06:05 -0700	1223 lines
[git/cctbx_project] master: Remove mask option in local sharpening (56bf33d20e)	CCTBX commit	Fri, 2 Oct 2020 13:48:34 -0600	477 lines
[git/cctbx_project] master: Skip search for map symmetry if no crystal symmetry found (84e34ba963)	CCTBX commit	Fri, 2 Oct 2020 12:29:22 -0600	544 lines
[git/cctbx_project] master: Update expected output (90fdcc083f)	CCTBX commit	Fri, 2 Oct 2020 10:39:46 -0700	100 lines
[git/cctbx_project] master: more model cleanup and required adjustments (19d6fa564f)	CCTBX commit	Fri, 2 Oct 2020 10:25:22 -0700	525 lines
[git/cctbx_project] master: Clean clutter (f1a42f110b)	CCTBX commit	Fri, 2 Oct 2020 09:19:12 -0700	64 lines
[git/cctbx_project] master: Fix find_map_symmetry (7f5b19f52f)	CCTBX commit	Fri, 2 Oct 2020 05:47:39 -0700	186 lines
[git/dxtbx] master: Enable Azure builds (#226) (05b8957)	DXTBX commit	Fri, 2 Oct 2020 09:44:44 +0100	3442 lines
[git/cctbx_project] master: silly error and more debug output (d8b3d24e9a)	CCTBX commit	Thu, 1 Oct 2020 18:01:18 -0700	148 lines
[git/cctbx_project] master: Update defaults for half_map sharpening (69f8b92146)	CCTBX commit	Thu, 1 Oct 2020 18:34:49 -0600	224 lines
[git/cctbx_project] master: Amber ensemble refinement (#536) (087e52fddc)	CCTBX commit	Thu, 1 Oct 2020 16:21:05 -0700	308 lines
[git/cctbx_project] master: mmtbx.model: starts of a major cleanup (a6d629f7e3)	CCTBX commit	Thu, 1 Oct 2020 16:10:23 -0700	989 lines
[git/cctbx_project] master: remove typo (c0e3473315)	CCTBX commit	Thu, 1 Oct 2020 16:45:28 -0600	87 lines
[git/cctbx_project] master: Catch case where no data in a bin (d2aecb2ded)	CCTBX commit	Thu, 1 Oct 2020 16:43:32 -0600	285 lines
[git/cctbx_project] master: fix typo (f2a6dc512f)	CCTBX commit	Thu, 1 Oct 2020 15:51:58 -0600	94 lines
[git/cctbx_project] master: catch case where box is too small for shells (802072c62b)	CCTBX commit	Thu, 1 Oct 2020 15:38:31 -0600	209 lines
[git/cctbx_project] master: Add NCS to local sharpening (5ffe54f039)	CCTBX commit	Thu, 1 Oct 2020 12:59:10 -0600	1359 lines
[git/cctbx_project] master: fix error message (b8d7aff405)	CCTBX commit	Wed, 30 Sep 2020 17:15:33 -0600	113 lines

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