JiscMail Logo
Email discussion lists for the UK Education and Research communities

Help for CCTBX-COMMIT Archives


CCTBX-COMMIT Archives

CCTBX-COMMIT Archives


June 2023


View:

Show Author | Hide Author

LISTSERV Archives

LISTSERV Archives

CCTBX-COMMIT Home

CCTBX-COMMIT Home

Options

Subscribe or Unsubscribe

Subscribe or Unsubscribe

Log In

Log In

Get Password

Get Password

Subject

From

Date Sorted by Date, Most Recent First

Size

[git/cctbx_project] master: Converting get_class to std::string to be able to handle longer residue names. More tests for extended fields. (33d71d7450)

CCTBX commit

Fri, 30 Jun 2023 15:41:01 -0700

1248 lines

[git/cctbx_project] master: Update CHANGELOG.rst for 2023.6 release (3268db1cd1)

CCTBX commit

Fri, 30 Jun 2023 13:32:31 -0700

97 lines

[git/cctbx_project] tag 'v2023.6' created

CCTBX commit

Fri, 30 Jun 2023 13:32:31 -0700

40 lines

[git/dxtbx] main: Drop Python 3.8 support (#642) (1625cfa4)

DXTBX commit

Fri, 30 Jun 2023 09:42:21 +0100

301 lines

[git/dxtbx] main: Use importlib instead of pkg_resources (#643) (71d4ec04)

DXTBX commit

Thu, 29 Jun 2023 21:24:38 +0000

369 lines

[git/dxtbx] main: DIALS 3.15.1 Changelog (6c6d6659)

DXTBX commit

Thu, 29 Jun 2023 20:24:55 +0100

112 lines

[git/cctbx_project] master: More informative plot for xfel.merge cosym worker. (7dccf75505)

CCTBX commit

Thu, 29 Jun 2023 10:05:06 -0700

129 lines

[git/cctbx_project] master: Merging program supports both mtz and sf.cif (#901) (cd5a215da6)

CCTBX commit

Thu, 29 Jun 2023 09:57:47 -0700

325 lines

[git/cctbx_project] master: Update README.md (bfa39fa581)

CCTBX commit

Wed, 28 Jun 2023 18:16:08 -0700

223 lines

[git/cctbx_project] master: added bound energy option to QMR (7d6e755dbc)

CCTBX commit

Wed, 28 Jun 2023 12:57:06 -0700

480 lines

[git/cctbx_project] master: Cleanup (b6e73b14ce)

CCTBX commit

Wed, 28 Jun 2023 11:31:03 -0700

170 lines

[git/cctbx_project] master: Switching hierarchy resname from str3 to std::string (f01dc58c69)

CCTBX commit

Wed, 28 Jun 2023 11:10:04 -0700

1273 lines

[git/cctbx_project] master: More robust implementation for is_similar_hierarchy (8febaf52e2)

CCTBX commit

Wed, 28 Jun 2023 11:10:04 -0700

105 lines

[git/cctbx_project] master: Mimic PDB behavior with changing resname from str3 to std::string, assuring resname is at least 3 characters long coming from mmCIF. (44f7d293c8)

CCTBX commit

Wed, 28 Jun 2023 11:10:04 -0700

146 lines

[git/cctbx_project] master: mmtbx.qi to run energies and some rama functions (2c503343e7)

CCTBX commit

Tue, 27 Jun 2023 15:38:27 -0700

272 lines

[git/cctbx_project] master: Refactoring out any_file usage where the type of the file is obvious. (#896) (7a88df91a6)

CCTBX commit

Tue, 27 Jun 2023 15:16:20 -0700

271 lines

[git/dxtbx] main: MNT: Skip tests removed from DLS filesystem (133ca8e4)

DXTBX commit

Tue, 27 Jun 2023 14:22:04 +0100

130 lines

[git/dxtbx] main: Fix for nxmx import overwritten by local variable (#641) (f5e835c1)

DXTBX commit

Tue, 27 Jun 2023 14:08:30 +0100

297 lines

[git/cctbx_project] master: CI: Use pytest=7.0.1 on Windows (39ac03778b)

CCTBX commit

Mon, 26 Jun 2023 17:36:54 -0700

97 lines

[git/cctbx_project] master: CI: switch to pip version of pytest 7.0 for Windows (d25bae85ab)

CCTBX commit

Mon, 26 Jun 2023 15:23:40 -0700

121 lines

[git/cctbx_project] master: Show error instead of traceback (6c51a547d6)

CCTBX commit

Mon, 26 Jun 2023 10:25:34 -0700

102 lines

[git/cctbx_project] master: Normalize diffuse rotations (#890) (1750992220)

CCTBX commit

Mon, 26 Jun 2023 09:31:07 -0600

1102 lines

[git/cctbx_project] master: Replace procrunner with subprocess (#892) (ca84390ca9)

CCTBX commit

Sat, 24 Jun 2023 12:50:12 -0700

533 lines

[git/cctbx_project] master: Preserve `expt.identifier` in diffBragg hopper (#891) (62a12d38a6)

CCTBX commit

Fri, 23 Jun 2023 16:16:27 -0700

90 lines

[git/cctbx_project] master: Update README.md (9176d5f999)

CCTBX commit

Fri, 23 Jun 2023 15:49:57 -0700

198 lines

[git/cctbx_project] master: tidy (2cd9e34992)

CCTBX commit

Fri, 23 Jun 2023 10:40:48 -0700

119 lines

[git/cctbx_project] master: update for iterate metals (eaa3bdd936)

CCTBX commit

Wed, 21 Jun 2023 17:22:13 -0700

483 lines

[git/cctbx_project] master: small mods to QI (984aaa57bc)

CCTBX commit

Wed, 21 Jun 2023 14:53:21 -0700

736 lines

[git/cctbx_project] master: fixed a glyco alpha2-6 test (325eb23d95)

CCTBX commit

Wed, 21 Jun 2023 13:36:21 -0700

147 lines

[git/cctbx_project] master: Z score option (c28cc8d04d)

CCTBX commit

Wed, 21 Jun 2023 11:55:37 -0700

103 lines

[git/cctbx_project] master: new link notifications in mmCIF (3315dcfd48)

CCTBX commit

Wed, 21 Jun 2023 11:51:55 -0700

450 lines

[git/cctbx_project] master: more specific glyco notes in mmCIF (1fb5e6850f)

CCTBX commit

Wed, 21 Jun 2023 10:34:32 -0700

207 lines

[git/cctbx_project] master: update (13e9006564)

CCTBX commit

Wed, 21 Jun 2023 10:34:32 -0700

91 lines

[git/cctbx_project] master: adjust min size of output (84cbdbb55f)

CCTBX commit

Wed, 21 Jun 2023 10:34:32 -0700

132 lines

[git/cctbx_project] master: more general sugar linking (aa874fe08a)

CCTBX commit

Wed, 21 Jun 2023 10:34:32 -0700

143 lines

[git/cctbx_project] master: Change damped_shift to keep in step with phasertng version of dtmin. This is more stable when gradients could lead to excessively large shifts. (921303065b)

CCTBX commit

Wed, 21 Jun 2023 14:00:41 +0100

136 lines

[git/cctbx_project] master: iotbx: reorder space group check in cif builder (409140eaee)

CCTBX commit

Tue, 20 Jun 2023 09:06:14 -0700

126 lines

[git/cctbx_project] master: Check for inconsistent symmetry information (see 6bbr where space group symbol is incompatible with symmetry operators. (5acbacd92f)

CCTBX commit

Fri, 16 Jun 2023 16:22:18 -0700

481 lines

[git/dxtbx] main: Remove dxtbx procrunner dependency (#640) (e7b27b4a)

DXTBX commit

Fri, 16 Jun 2023 09:22:58 +0100

220 lines

[git/cctbx_project] master: Bug fix: deal with case of no input nor new water (341d1fb94b)

CCTBX commit

Thu, 15 Jun 2023 21:00:47 -0700

115 lines

[git/cctbx_project] master: Fix for python 3 (12e0447dd7)

CCTBX commit

Thu, 15 Jun 2023 20:01:27 -0700

96 lines

[git/cctbx_project] master: work-around to use grid_step (9f6638769e)

CCTBX commit

Thu, 15 Jun 2023 20:01:27 -0700

151 lines

[git/cctbx_project] master: DataManager: set string default for help message (f7e1eedebb)

CCTBX commit

Thu, 15 Jun 2023 12:17:16 -0700

130 lines

[git/cctbx_project] master: Fix typo. (35b71fc6c9)

CCTBX commit

Wed, 14 Jun 2023 16:47:06 -0700

87 lines

[git/cctbx_project] master: DataManager: consolidate fmodel setup into base class (5210fe0e28)

CCTBX commit

Wed, 14 Jun 2023 16:20:14 -0700

158 lines

[git/cctbx_project] master: First test with long chain ids. (0c878892d1)

CCTBX commit

Wed, 14 Jun 2023 16:00:52 -0700

1297 lines

[git/cctbx_project] master: iotbx: clean up help message for R-free flags in reflection_file_server (994f041239)

CCTBX commit

Wed, 14 Jun 2023 12:14:50 -0700

157 lines

[git/cctbx_project] master: Convert residue id from hy36 when outputting mmCIF. (7a114e70a9)

CCTBX commit

Tue, 13 Jun 2023 14:51:12 -0700

99 lines

[git/dxtbx] main: Bump version: 3.15.dev → 3.16.dev (700bb2e3)

DXTBX commit

Tue, 13 Jun 2023 14:32:09 +0100

111 lines

[git/dxtbx] main: dxtbx 3.15.0 Changelog (d0871c70)

DXTBX commit

Tue, 13 Jun 2023 14:32:09 +0100

243 lines

[git/dxtbx] tag 'v3.15.0' created

DXTBX commit

Tue, 13 Jun 2023 14:32:09 +0100

40 lines

[git/dxtbx] main: MNT: Update CCTBX prebuilt version for CI (2bbcc86a)

DXTBX commit

Tue, 13 Jun 2023 14:26:05 +0100

88 lines

[git/cctbx_project] master: allow use of numpy NAN instead of None (54f1ee4eb9)

CCTBX commit

Mon, 12 Jun 2023 18:36:47 -0400

93 lines

[git/dxtbx] main: Use orderedset.OrderedSet (#639) (e78fe37d)

DXTBX commit

Mon, 12 Jun 2023 13:34:06 +0000

136 lines

[git/dxtbx] main: FormatSMVRigakuSaturn: Recognise multi-axis crystal goniometers (#617) (ca47d2d9)

DXTBX commit

Mon, 12 Jun 2023 08:56:09 +0000

285 lines

[git/dxtbx] main: Handle no conda for system_includes (#630) (666288c0)

DXTBX commit

Mon, 12 Jun 2023 09:29:21 +0100

114 lines

[git/cctbx_project] master: Rotate axes for diffBragg anisotropic diffuse (#886) (d91990a48a)

CCTBX commit

Fri, 9 Jun 2023 11:32:08 -0600

214 lines

[git/cctbx_project] master: updates to the QI programs (e490c1be29)

CCTBX commit

Mon, 5 Jun 2023 15:33:14 -0700

1050 lines

[git/cctbx_project] master: updated modified amino acids (1ad2602162)

CCTBX commit

Mon, 5 Jun 2023 15:33:14 -0700

1842 lines

[git/cctbx_project] master: Turn off using experimental phases in MolProbity as they are not necessary and it conflicts with automatic twin detection (c666c4d696)

CCTBX commit

Mon, 5 Jun 2023 06:55:50 -0600

156 lines

[git/cctbx_project] master: Change output_level to level for consistency with phaser_voyager usage. (e849e5d21f)

CCTBX commit

Mon, 5 Jun 2023 11:29:41 +0100

166 lines

[git/cctbx_project] master: Attempt to make test more stable by shortening query sequence. For some reason RCSB is not always finding whole lysozyme. (26381e1757)

CCTBX commit

Fri, 2 Jun 2023 10:08:47 -0700

105 lines

[git/dxtbx] main: Bruker general Photon format (#637) (842d4593)

DXTBX commit

Fri, 2 Jun 2023 16:08:47 +0000

1433 lines

[git/cctbx_project] master: DataManager: clean up x_ray versus neutron parameter settings (94d813234a)

CCTBX commit

Thu, 1 Jun 2023 12:17:51 -0700

143 lines

[git/cctbx_project] tag 'v2023.5' created

CCTBX commit

Thu, 1 Jun 2023 09:30:36 -0700

40 lines

[git/cctbx_project] master: Update CHANGELOG.rst for 2023.5 release (ad1b1303c6)

CCTBX commit

Thu, 1 Jun 2023 09:30:36 -0700

98 lines

JiscMail Tools


RSS Feeds and Sharing


Advanced Options


Archives

May 2024
April 2024
March 2024
February 2024
January 2024
December 2023
November 2023
October 2023
September 2023
August 2023
July 2023
June 2023
May 2023
April 2023
March 2023
February 2023
January 2023
December 2022
November 2022
October 2022
September 2022
August 2022
July 2022
June 2022
May 2022
April 2022
March 2022
February 2022
January 2022
December 2021
November 2021
October 2021
September 2021
August 2021
July 2021
June 2021
May 2021
April 2021
March 2021
February 2021
January 2021
December 2020
November 2020
October 2020
September 2020
August 2020
July 2020
June 2020
May 2020
April 2020
March 2020
February 2020
January 2020
December 2019
November 2019
October 2019
September 2019
August 2019
July 2019
June 2019
May 2019
April 2019
March 2019
February 2019
January 2019
December 2018
November 2018
October 2018
September 2018
August 2018
July 2018
June 2018
May 2018
April 2018
March 2018
February 2018
January 2018
December 2017
November 2017
October 2017
September 2017
August 2017
July 2017
June 2017
May 2017
April 2017
March 2017
February 2017
January 2017
December 2016
November 2016


JiscMail is a Jisc service.

View our service policies at https://www.jiscmail.ac.uk/policyandsecurity/ and Jisc's privacy policy at https://www.jisc.ac.uk/website/privacy-notice

For help and support help@jisc.ac.uk

Secured by F-Secure Anti-Virus CataList Email List Search Powered by the LISTSERV Email List Manager